Gene : Glyma.15G074300 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR11771//PTHR11771:SF56 - LIPOXYGENASE Genomic Order:  743
Name:  ? Glyma.15G074300 Secondary Identifier:  ? PAC:30498692
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-735 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G074300 0.5kb upstream 0.5kb upstream 2450 true Chr15: 5688338-5690787 Glycine max
Glyma.15G074300 0.5kb upstream 0.5kb upstream 500 false Chr15: 5688338-5688837 Glycine max
Glyma.15G074300 0.5kb downstream 0.5kb downstream 2450 true Chr15: 5688838-5691287 Glycine max
Glyma.15G074300 0.5kb downstream 0.5kb downstream 500 false Chr15: 5690788-5691287 Glycine max
Glyma.15G074300 1.0kb upstream 1.0kb upstream 2950 true Chr15: 5687838-5690787 Glycine max
Glyma.15G074300 1.0kb upstream 1.0kb upstream 1000 false Chr15: 5687838-5688837 Glycine max
Glyma.15G074300 1.0kb downstream 1.0kb downstream 2950 true Chr15: 5688838-5691787 Glycine max
Glyma.15G074300 1.0kb downstream 1.0kb downstream 1000 false Chr15: 5690788-5691787 Glycine max
Glyma.15G074300 2.0kb upstream 2.0kb upstream 3950 true Chr15: 5686838-5690787 Glycine max
Glyma.15G074300 2.0kb upstream 2.0kb upstream 2000 false Chr15: 5686838-5688837 Glycine max
Glyma.15G074300 2.0kb downstream 2.0kb downstream 3950 true Chr15: 5688838-5692787 Glycine max
Glyma.15G074300 2.0kb downstream 2.0kb downstream 2000 false Chr15: 5690788-5692787 Glycine max
Glyma.15G074300 5.0kb upstream 5.0kb upstream 6950 true Chr15: 5683838-5690787 Glycine max
Glyma.15G074300 5.0kb upstream 5.0kb upstream 5000 false Chr15: 5683838-5688837 Glycine max
Glyma.15G074300 5.0kb downstream 5.0kb downstream 6950 true Chr15: 5688838-5695787 Glycine max
Glyma.15G074300 5.0kb downstream 5.0kb downstream 5000 false Chr15: 5690788-5695787 Glycine max
Glyma.15G074300 10.0kb upstream 10.0kb upstream 11950 true Chr15: 5678838-5690787 Glycine max
Glyma.15G074300 10.0kb upstream 10.0kb upstream 10000 false Chr15: 5678838-5688837 Glycine max
Glyma.15G074300 10.0kb downstream 10.0kb downstream 11950 true Chr15: 5688838-5700787 Glycine max
Glyma.15G074300 10.0kb downstream 10.0kb downstream 10000 false Chr15: 5690788-5700787 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122316039 5265 Fabidae View MSA
124071264 5270 Rosid View MSA
123750087 5271 Pentapetalae View MSA
122788853 5272 Eudicot View MSA
122051623 5273 Angiosperm View MSA
123429188 5275 Viridiplantae View MSA
121351701 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.412071 0.0 1.56409   High
cufflinks 0.0175763 0.0 0.0797089 Low Low
cufflinks 0.0669784 0.0 0.273558 Low  
cufflinks 0.0193332 0.0 0.0867526 Low Low
cufflinks 0.195335 0.0 0.764913 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0155476 0.0 0.0712111 Low Low
cufflinks 0.262141 0.0 1.01426    
cufflinks 0.530437 0.0 1.98971   High
cufflinks 0.161        
cufflinks 0.371        
cufflinks 0.033     Low  
cufflinks 0.048     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.64       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.41        
cufflinks 0.033     Low  
cufflinks 0.014     Low Low
cufflinks 0.01     Low Low
cufflinks 0.529       High
cufflinks 0.074     Low  
cufflinks 0.053     Low  
cufflinks 0.306        
cufflinks 0.054     Low  
cufflinks 0.831       High

0 Strain