Gene : Glyma.15G075000 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR13935:SF46 - BASIC HELIX-LOOP-HELIX DOMAIN-CONTAINING PROTEIN Genomic Order:  750
Name:  ? Glyma.15G075000 Secondary Identifier:  ? PAC:30498533
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G075000 0.5kb upstream 0.5kb upstream 2176 true Chr15: 5754010-5756185 Glycine max
Glyma.15G075000 0.5kb upstream 0.5kb upstream 500 false Chr15: 5754010-5754509 Glycine max
Glyma.15G075000 0.5kb downstream 0.5kb downstream 2176 true Chr15: 5754510-5756685 Glycine max
Glyma.15G075000 0.5kb downstream 0.5kb downstream 500 false Chr15: 5756186-5756685 Glycine max
Glyma.15G075000 1.0kb upstream 1.0kb upstream 2676 true Chr15: 5753510-5756185 Glycine max
Glyma.15G075000 1.0kb upstream 1.0kb upstream 1000 false Chr15: 5753510-5754509 Glycine max
Glyma.15G075000 1.0kb downstream 1.0kb downstream 2676 true Chr15: 5754510-5757185 Glycine max
Glyma.15G075000 1.0kb downstream 1.0kb downstream 1000 false Chr15: 5756186-5757185 Glycine max
Glyma.15G075000 2.0kb upstream 2.0kb upstream 3676 true Chr15: 5752510-5756185 Glycine max
Glyma.15G075000 2.0kb upstream 2.0kb upstream 2000 false Chr15: 5752510-5754509 Glycine max
Glyma.15G075000 2.0kb downstream 2.0kb downstream 3676 true Chr15: 5754510-5758185 Glycine max
Glyma.15G075000 2.0kb downstream 2.0kb downstream 2000 false Chr15: 5756186-5758185 Glycine max
Glyma.15G075000 5.0kb upstream 5.0kb upstream 6676 true Chr15: 5749510-5756185 Glycine max
Glyma.15G075000 5.0kb upstream 5.0kb upstream 5000 false Chr15: 5749510-5754509 Glycine max
Glyma.15G075000 5.0kb downstream 5.0kb downstream 6676 true Chr15: 5754510-5761185 Glycine max
Glyma.15G075000 5.0kb downstream 5.0kb downstream 5000 false Chr15: 5756186-5761185 Glycine max
Glyma.15G075000 10.0kb upstream 10.0kb upstream 11676 true Chr15: 5744510-5756185 Glycine max
Glyma.15G075000 10.0kb upstream 10.0kb upstream 10000 false Chr15: 5744510-5754509 Glycine max
Glyma.15G075000 10.0kb downstream 10.0kb downstream 11676 true Chr15: 5754510-5766185 Glycine max
Glyma.15G075000 10.0kb downstream 10.0kb downstream 10000 false Chr15: 5756186-5766185 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040931 5273 Angiosperm View MSA
122309739 5265 Fabidae View MSA
124073436 5270 Rosid View MSA
123745471 5271 Pentapetalae View MSA
122795033 5272 Eudicot View MSA
121309769 5274 Embryophyte View MSA
123347432 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.01915 0.0 7.22131   High
cufflinks 0.405035 0.0 1.56856    
cufflinks 0.23395 0.0 0.926116    
cufflinks 0.100295 0.0 0.41213 Low  
cufflinks 0.0543872 0.0 0.233078 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.341668 0.0 1.33406    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 8.727     High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.975        
cufflinks 0.009     Low Low
cufflinks 0.025     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.176        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.465        
cufflinks 1.509        
cufflinks 0.237        
cufflinks 0.025     Low Low
cufflinks 0.136        
cufflinks 0.877        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.234        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain