Gene : Glyma.15G075200 G. max Wm82.a2.v1
Defline:  (1 of 75) PF05678 - VQ motif (VQ) Genomic Order:  752
Name:  ? Glyma.15G075200 Secondary Identifier:  ? PAC:30496292
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G075200 0.5kb upstream 0.5kb upstream 3292 true Chr15: 5769326-5772617 Glycine max
Glyma.15G075200 0.5kb upstream 0.5kb upstream 500 false Chr15: 5769326-5769825 Glycine max
Glyma.15G075200 0.5kb downstream 0.5kb downstream 3292 true Chr15: 5769826-5773117 Glycine max
Glyma.15G075200 0.5kb downstream 0.5kb downstream 500 false Chr15: 5772618-5773117 Glycine max
Glyma.15G075200 1.0kb upstream 1.0kb upstream 3792 true Chr15: 5768826-5772617 Glycine max
Glyma.15G075200 1.0kb upstream 1.0kb upstream 1000 false Chr15: 5768826-5769825 Glycine max
Glyma.15G075200 1.0kb downstream 1.0kb downstream 3792 true Chr15: 5769826-5773617 Glycine max
Glyma.15G075200 1.0kb downstream 1.0kb downstream 1000 false Chr15: 5772618-5773617 Glycine max
Glyma.15G075200 2.0kb upstream 2.0kb upstream 4792 true Chr15: 5767826-5772617 Glycine max
Glyma.15G075200 2.0kb upstream 2.0kb upstream 2000 false Chr15: 5767826-5769825 Glycine max
Glyma.15G075200 2.0kb downstream 2.0kb downstream 4792 true Chr15: 5769826-5774617 Glycine max
Glyma.15G075200 2.0kb downstream 2.0kb downstream 2000 false Chr15: 5772618-5774617 Glycine max
Glyma.15G075200 5.0kb upstream 5.0kb upstream 7792 true Chr15: 5764826-5772617 Glycine max
Glyma.15G075200 5.0kb upstream 5.0kb upstream 5000 false Chr15: 5764826-5769825 Glycine max
Glyma.15G075200 5.0kb downstream 5.0kb downstream 7792 true Chr15: 5769826-5777617 Glycine max
Glyma.15G075200 5.0kb downstream 5.0kb downstream 5000 false Chr15: 5772618-5777617 Glycine max
Glyma.15G075200 10.0kb upstream 10.0kb upstream 12792 true Chr15: 5759826-5772617 Glycine max
Glyma.15G075200 10.0kb upstream 10.0kb upstream 10000 false Chr15: 5759826-5769825 Glycine max
Glyma.15G075200 10.0kb downstream 10.0kb downstream 12792 true Chr15: 5769826-5782617 Glycine max
Glyma.15G075200 10.0kb downstream 10.0kb downstream 10000 false Chr15: 5772618-5782617 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307242 5265 Fabidae View MSA
124073802 5270 Rosid View MSA
123750842 5271 Pentapetalae View MSA
122795090 5272 Eudicot View MSA
122046673 5273 Angiosperm View MSA
121347985 5274 Embryophyte View MSA
123380701 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 77.7984 0.0 254.616 High High
cufflinks 12.7655 0.0 48.9024    
cufflinks 18.1639 0.0 64.1379    
cufflinks 14.1484 0.0 52.8002    
cufflinks 7.10217 0.0 26.3494    
cufflinks 2.09838 0.0 9.40753   Low
cufflinks 4.84972 0.0 17.5157    
cufflinks 24.1384 0.0 79.887 High  
cufflinks 6.98831 0.0 23.0826    
cufflinks 6.057       High
cufflinks 1.418        
cufflinks 2.405        
cufflinks 0.567       Low
cufflinks 0.341       Low
cufflinks 2.64        
cufflinks 1.997        
cufflinks 1.646        
cufflinks 2.704        
cufflinks 2.069        
cufflinks 1.78        
cufflinks 2.751        
cufflinks 1.982        
cufflinks 1.693        
cufflinks 1.254        
cufflinks 1.512        
cufflinks 1.639        

0 Strain