Gene : Glyma.15G075500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR22847//PTHR22847:SF429 - WD40 REPEAT PROTEIN Genomic Order:  755
Name:  ? Glyma.15G075500 Secondary Identifier:  ? PAC:30495768
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G075500 0.5kb upstream 0.5kb upstream 9305 true Chr15: 5796485-5805789 Glycine max
Glyma.15G075500 0.5kb upstream 0.5kb upstream 500 false Chr15: 5796485-5796984 Glycine max
Glyma.15G075500 0.5kb downstream 0.5kb downstream 9305 true Chr15: 5796985-5806289 Glycine max
Glyma.15G075500 0.5kb downstream 0.5kb downstream 500 false Chr15: 5805790-5806289 Glycine max
Glyma.15G075500 1.0kb upstream 1.0kb upstream 9805 true Chr15: 5795985-5805789 Glycine max
Glyma.15G075500 1.0kb upstream 1.0kb upstream 1000 false Chr15: 5795985-5796984 Glycine max
Glyma.15G075500 1.0kb downstream 1.0kb downstream 9805 true Chr15: 5796985-5806789 Glycine max
Glyma.15G075500 1.0kb downstream 1.0kb downstream 1000 false Chr15: 5805790-5806789 Glycine max
Glyma.15G075500 2.0kb upstream 2.0kb upstream 10805 true Chr15: 5794985-5805789 Glycine max
Glyma.15G075500 2.0kb upstream 2.0kb upstream 2000 false Chr15: 5794985-5796984 Glycine max
Glyma.15G075500 2.0kb downstream 2.0kb downstream 10805 true Chr15: 5796985-5807789 Glycine max
Glyma.15G075500 2.0kb downstream 2.0kb downstream 2000 false Chr15: 5805790-5807789 Glycine max
Glyma.15G075500 5.0kb upstream 5.0kb upstream 13805 true Chr15: 5791985-5805789 Glycine max
Glyma.15G075500 5.0kb upstream 5.0kb upstream 5000 false Chr15: 5791985-5796984 Glycine max
Glyma.15G075500 5.0kb downstream 5.0kb downstream 13805 true Chr15: 5796985-5810789 Glycine max
Glyma.15G075500 5.0kb downstream 5.0kb downstream 5000 false Chr15: 5805790-5810789 Glycine max
Glyma.15G075500 10.0kb upstream 10.0kb upstream 18805 true Chr15: 5786985-5805789 Glycine max
Glyma.15G075500 10.0kb upstream 10.0kb upstream 10000 false Chr15: 5786985-5796984 Glycine max
Glyma.15G075500 10.0kb downstream 10.0kb downstream 18805 true Chr15: 5796985-5815789 Glycine max
Glyma.15G075500 10.0kb downstream 10.0kb downstream 10000 false Chr15: 5805790-5815789 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309773 5265 Fabidae View MSA
124072313 5270 Rosid View MSA
123751820 5271 Pentapetalae View MSA
122789823 5272 Eudicot View MSA
122046787 5273 Angiosperm View MSA
123429146 5275 Viridiplantae View MSA
121350041 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.102303 0.0 0.399729 Low  
cufflinks 0.172663 0.0 0.871848 Low  
cufflinks 0.0619329 0.0 0.245952 Low  
cufflinks 0.892291 0.0 4.70725   High
cufflinks 0.109278 0.0 0.804732 Low  
cufflinks 0.174754 0.0 0.835685 Low  
cufflinks 4.33649 0.0 14.7815   High
cufflinks 0.0083057 0.0 0.0432679 Low Low
cufflinks 0.0166616 0.0 0.0730644 Low Low
cufflinks 0.01     Low  
cufflinks 0.001     Low Low
cufflinks 0.042     Low  
cufflinks 0.014     Low  
cufflinks 0.023     Low  
cufflinks 0.002     Low Low
cufflinks 0.07     Low  
cufflinks 0.001     Low Low
cufflinks 0.096     Low High
cufflinks 0.019     Low  
cufflinks 0.048     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.065     Low  
cufflinks 0.07     Low  
cufflinks 0.001     Low Low
cufflinks 0.052     Low  
cufflinks 0.005     Low  

0 Strain