Gene : Glyma.15G121800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR21297:SF2 - DNA-DIRECTED RNA POLYMERASES IV AND V SUBUNIT 4 Genomic Order:  1218
Name:  ? Glyma.15G121800 Secondary Identifier:  ? PAC:30498629
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G121800 0.5kb upstream 0.5kb upstream 4828 true Chr15: 9643246-9648073 Glycine max
Glyma.15G121800 0.5kb upstream 0.5kb upstream 500 false Chr15: 9643246-9643745 Glycine max
Glyma.15G121800 0.5kb downstream 0.5kb downstream 4828 true Chr15: 9643746-9648573 Glycine max
Glyma.15G121800 0.5kb downstream 0.5kb downstream 500 false Chr15: 9648074-9648573 Glycine max
Glyma.15G121800 1.0kb upstream 1.0kb upstream 5328 true Chr15: 9642746-9648073 Glycine max
Glyma.15G121800 1.0kb upstream 1.0kb upstream 1000 false Chr15: 9642746-9643745 Glycine max
Glyma.15G121800 1.0kb downstream 1.0kb downstream 5328 true Chr15: 9643746-9649073 Glycine max
Glyma.15G121800 1.0kb downstream 1.0kb downstream 1000 false Chr15: 9648074-9649073 Glycine max
Glyma.15G121800 2.0kb upstream 2.0kb upstream 6328 true Chr15: 9641746-9648073 Glycine max
Glyma.15G121800 2.0kb upstream 2.0kb upstream 2000 false Chr15: 9641746-9643745 Glycine max
Glyma.15G121800 2.0kb downstream 2.0kb downstream 6328 true Chr15: 9643746-9650073 Glycine max
Glyma.15G121800 2.0kb downstream 2.0kb downstream 2000 false Chr15: 9648074-9650073 Glycine max
Glyma.15G121800 5.0kb upstream 5.0kb upstream 9328 true Chr15: 9638746-9648073 Glycine max
Glyma.15G121800 5.0kb upstream 5.0kb upstream 5000 false Chr15: 9638746-9643745 Glycine max
Glyma.15G121800 5.0kb downstream 5.0kb downstream 9328 true Chr15: 9643746-9653073 Glycine max
Glyma.15G121800 5.0kb downstream 5.0kb downstream 5000 false Chr15: 9648074-9653073 Glycine max
Glyma.15G121800 10.0kb upstream 10.0kb upstream 14328 true Chr15: 9633746-9648073 Glycine max
Glyma.15G121800 10.0kb upstream 10.0kb upstream 10000 false Chr15: 9633746-9643745 Glycine max
Glyma.15G121800 10.0kb downstream 10.0kb downstream 14328 true Chr15: 9643746-9658073 Glycine max
Glyma.15G121800 10.0kb downstream 10.0kb downstream 10000 false Chr15: 9648074-9658073 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299634 5265 Fabidae View MSA
124061465 5270 Rosid View MSA
123744062 5271 Pentapetalae View MSA
122792383 5272 Eudicot View MSA
122048092 5273 Angiosperm View MSA
123429036 5275 Viridiplantae View MSA
121349369 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.58662 0.0 9.67906   Low
cufflinks 10.4026 0.0 38.6173   High
cufflinks 2.86462 0.0 14.0069   Low
cufflinks 6.04822 0.0 26.1656    
cufflinks 6.75619 0.0 29.0028    
cufflinks 5.1586 0.0 15.9393    
cufflinks 7.68784 0.0 31.383    
cufflinks 7.17028 0.0 34.5522    
cufflinks 8.15949 0.0 36.9981    
cufflinks 0.578        
cufflinks 0.091       Low
cufflinks 0.63        
cufflinks 0.7        
cufflinks 0.767        
cufflinks 0.277        
cufflinks 0.462        
cufflinks 0.276        
cufflinks 0.788        
cufflinks 1.208       High
cufflinks 0.318        
cufflinks 0.154       Low
cufflinks 0.405        
cufflinks 0.738        
cufflinks 0.092       Low
cufflinks 0.471        
cufflinks 0.206        

0 Strain