Gene : Glyma.15G122400 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR15598 - AUTOANTIGEN RCD8 Genomic Order:  1224
Name:  ? Glyma.15G122400 Secondary Identifier:  ? PAC:30495771
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G122400 0.5kb upstream 0.5kb upstream 11339 true Chr15: 9715781-9727119 Glycine max
Glyma.15G122400 0.5kb upstream 0.5kb upstream 500 false Chr15: 9715781-9716280 Glycine max
Glyma.15G122400 0.5kb downstream 0.5kb downstream 11339 true Chr15: 9716281-9727619 Glycine max
Glyma.15G122400 0.5kb downstream 0.5kb downstream 500 false Chr15: 9727120-9727619 Glycine max
Glyma.15G122400 1.0kb upstream 1.0kb upstream 11839 true Chr15: 9715281-9727119 Glycine max
Glyma.15G122400 1.0kb upstream 1.0kb upstream 1000 false Chr15: 9715281-9716280 Glycine max
Glyma.15G122400 1.0kb downstream 1.0kb downstream 11839 true Chr15: 9716281-9728119 Glycine max
Glyma.15G122400 1.0kb downstream 1.0kb downstream 1000 false Chr15: 9727120-9728119 Glycine max
Glyma.15G122400 2.0kb upstream 2.0kb upstream 12839 true Chr15: 9714281-9727119 Glycine max
Glyma.15G122400 2.0kb upstream 2.0kb upstream 2000 false Chr15: 9714281-9716280 Glycine max
Glyma.15G122400 2.0kb downstream 2.0kb downstream 12839 true Chr15: 9716281-9729119 Glycine max
Glyma.15G122400 2.0kb downstream 2.0kb downstream 2000 false Chr15: 9727120-9729119 Glycine max
Glyma.15G122400 5.0kb upstream 5.0kb upstream 15839 true Chr15: 9711281-9727119 Glycine max
Glyma.15G122400 5.0kb upstream 5.0kb upstream 5000 false Chr15: 9711281-9716280 Glycine max
Glyma.15G122400 5.0kb downstream 5.0kb downstream 15839 true Chr15: 9716281-9732119 Glycine max
Glyma.15G122400 5.0kb downstream 5.0kb downstream 5000 false Chr15: 9727120-9732119 Glycine max
Glyma.15G122400 10.0kb upstream 10.0kb upstream 20839 true Chr15: 9706281-9727119 Glycine max
Glyma.15G122400 10.0kb upstream 10.0kb upstream 10000 false Chr15: 9706281-9716280 Glycine max
Glyma.15G122400 10.0kb downstream 10.0kb downstream 20839 true Chr15: 9716281-9737119 Glycine max
Glyma.15G122400 10.0kb downstream 10.0kb downstream 10000 false Chr15: 9727120-9737119 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040895 5273 Angiosperm View MSA
122309349 5265 Fabidae View MSA
124069633 5270 Rosid View MSA
123751753 5271 Pentapetalae View MSA
122786299 5272 Eudicot View MSA
121349144 5274 Embryophyte View MSA
123424183 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.8814 0.0 39.5082    
cufflinks 7.99052 0.0 28.0912    
cufflinks 13.5296 0.0 51.4614   High
cufflinks 11.8482 0.0 37.9518    
cufflinks 8.8633 0.0 31.3168    
cufflinks 5.67527 0.0 19.4517   Low
cufflinks 15.0428 0.0 58.4009   High
cufflinks 10.3167 0.0 37.5038    
cufflinks 10.0134 0.0 31.1715    
cufflinks 2.816        
cufflinks 2.432        
cufflinks 3.273       High
cufflinks 2.501        
cufflinks 2.542        
cufflinks 2.217        
cufflinks 2.56        
cufflinks 1.694       Low
cufflinks 3.329       High
cufflinks 3.001       High
cufflinks 2.543        
cufflinks 2.411        
cufflinks 2.67        
cufflinks 2.004       Low
cufflinks 2.647        
cufflinks 2.5        
cufflinks 2.336        

0 Strain