Gene : Glyma.15G124000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31807:SF6 - PROTEIN ENDOSPERM DEFECTIVE 1-RELATED Genomic Order:  1240
Name:  ? Glyma.15G124000 Secondary Identifier:  ? PAC:30496311
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G124000 0.5kb upstream 0.5kb upstream 4716 true Chr15: 9845097-9849812 Glycine max
Glyma.15G124000 0.5kb upstream 0.5kb upstream 500 false Chr15: 9849313-9849812 Glycine max
Glyma.15G124000 0.5kb downstream 0.5kb downstream 4716 true Chr15: 9844597-9849312 Glycine max
Glyma.15G124000 0.5kb downstream 0.5kb downstream 500 false Chr15: 9844597-9845096 Glycine max
Glyma.15G124000 1.0kb upstream 1.0kb upstream 5216 true Chr15: 9845097-9850312 Glycine max
Glyma.15G124000 1.0kb upstream 1.0kb upstream 1000 false Chr15: 9849313-9850312 Glycine max
Glyma.15G124000 1.0kb downstream 1.0kb downstream 5216 true Chr15: 9844097-9849312 Glycine max
Glyma.15G124000 1.0kb downstream 1.0kb downstream 1000 false Chr15: 9844097-9845096 Glycine max
Glyma.15G124000 2.0kb upstream 2.0kb upstream 6216 true Chr15: 9845097-9851312 Glycine max
Glyma.15G124000 2.0kb upstream 2.0kb upstream 2000 false Chr15: 9849313-9851312 Glycine max
Glyma.15G124000 2.0kb downstream 2.0kb downstream 6216 true Chr15: 9843097-9849312 Glycine max
Glyma.15G124000 2.0kb downstream 2.0kb downstream 2000 false Chr15: 9843097-9845096 Glycine max
Glyma.15G124000 5.0kb upstream 5.0kb upstream 9216 true Chr15: 9845097-9854312 Glycine max
Glyma.15G124000 5.0kb upstream 5.0kb upstream 5000 false Chr15: 9849313-9854312 Glycine max
Glyma.15G124000 5.0kb downstream 5.0kb downstream 9216 true Chr15: 9840097-9849312 Glycine max
Glyma.15G124000 5.0kb downstream 5.0kb downstream 5000 false Chr15: 9840097-9845096 Glycine max
Glyma.15G124000 10.0kb upstream 10.0kb upstream 14216 true Chr15: 9845097-9859312 Glycine max
Glyma.15G124000 10.0kb upstream 10.0kb upstream 10000 false Chr15: 9849313-9859312 Glycine max
Glyma.15G124000 10.0kb downstream 10.0kb downstream 14216 true Chr15: 9835097-9849312 Glycine max
Glyma.15G124000 10.0kb downstream 10.0kb downstream 10000 false Chr15: 9835097-9845096 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309438 5265 Fabidae View MSA
124067070 5270 Rosid View MSA
123752575 5271 Pentapetalae View MSA
122788375 5272 Eudicot View MSA
122044458 5273 Angiosperm View MSA
121348675 5274 Embryophyte View MSA
123426167 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0186062 0.0 0.0792902 Low Low
cufflinks 1.85282 0.0 5.93808    
cufflinks 0.135485 0.0 0.524686 Low  
cufflinks 0.649879 0.0 2.32487    
cufflinks 1.34185 0.0 4.48214    
cufflinks 1.03076 0.0 3.55122    
cufflinks 0.851083 0.0 2.98253    
cufflinks 1.25712 0.0 4.22994    
cufflinks 1.27883 0.0 4.29933    
cufflinks 0.658        
cufflinks 0.09        
cufflinks 0.281        
cufflinks 0.988        
cufflinks 1.377        
cufflinks 0.009     Low Low
cufflinks 1.133        
cufflinks 0.128        
cufflinks 0.21        
cufflinks 1.113        
cufflinks 1.068        
cufflinks 0.11        
cufflinks 1.082        
cufflinks 1.498       High
cufflinks 0.103        
cufflinks 0.813        
cufflinks 0.215        

0 Strain