Gene : Glyma.15G127600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR15140 - TUBULIN-SPECIFIC CHAPERONE E Genomic Order:  1276
Name:  ? Glyma.15G127600 Secondary Identifier:  ? PAC:30499435
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G127600 0.5kb upstream 0.5kb upstream 8996 true Chr15: 10133939-10142934 Glycine max
Glyma.15G127600 0.5kb upstream 0.5kb upstream 500 false Chr15: 10142435-10142934 Glycine max
Glyma.15G127600 0.5kb downstream 0.5kb downstream 8996 true Chr15: 10133439-10142434 Glycine max
Glyma.15G127600 0.5kb downstream 0.5kb downstream 500 false Chr15: 10133439-10133938 Glycine max
Glyma.15G127600 1.0kb upstream 1.0kb upstream 9496 true Chr15: 10133939-10143434 Glycine max
Glyma.15G127600 1.0kb upstream 1.0kb upstream 1000 false Chr15: 10142435-10143434 Glycine max
Glyma.15G127600 1.0kb downstream 1.0kb downstream 9496 true Chr15: 10132939-10142434 Glycine max
Glyma.15G127600 1.0kb downstream 1.0kb downstream 1000 false Chr15: 10132939-10133938 Glycine max
Glyma.15G127600 2.0kb upstream 2.0kb upstream 10496 true Chr15: 10133939-10144434 Glycine max
Glyma.15G127600 2.0kb upstream 2.0kb upstream 2000 false Chr15: 10142435-10144434 Glycine max
Glyma.15G127600 2.0kb downstream 2.0kb downstream 10496 true Chr15: 10131939-10142434 Glycine max
Glyma.15G127600 2.0kb downstream 2.0kb downstream 2000 false Chr15: 10131939-10133938 Glycine max
Glyma.15G127600 5.0kb upstream 5.0kb upstream 13496 true Chr15: 10133939-10147434 Glycine max
Glyma.15G127600 5.0kb upstream 5.0kb upstream 5000 false Chr15: 10142435-10147434 Glycine max
Glyma.15G127600 5.0kb downstream 5.0kb downstream 13496 true Chr15: 10128939-10142434 Glycine max
Glyma.15G127600 5.0kb downstream 5.0kb downstream 5000 false Chr15: 10128939-10133938 Glycine max
Glyma.15G127600 10.0kb upstream 10.0kb upstream 18496 true Chr15: 10133939-10152434 Glycine max
Glyma.15G127600 10.0kb upstream 10.0kb upstream 10000 false Chr15: 10142435-10152434 Glycine max
Glyma.15G127600 10.0kb downstream 10.0kb downstream 18496 true Chr15: 10123939-10142434 Glycine max
Glyma.15G127600 10.0kb downstream 10.0kb downstream 10000 false Chr15: 10123939-10133938 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122030361 5273 Angiosperm View MSA
122241067 5265 Fabidae Singleton cluster - no MSA
123986000 5270 Rosid Singleton cluster - no MSA
123561378 5271 Pentapetalae Singleton cluster - no MSA
122596168 5272 Eudicot Singleton cluster - no MSA
121299542 5274 Embryophyte View MSA
123427074 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.64926 0.0 16.6287   High
cufflinks 1.26455 0.0 4.47046   Low
cufflinks 2.86114 0.0 9.18649    
cufflinks 1.42634 0.0 4.99071   Low
cufflinks 3.49239 0.0 11.0241    
cufflinks 3.23918 0.0 10.2976    
cufflinks 2.1311 0.0 7.19971    
cufflinks 1.32475 0.0 4.66183   Low
cufflinks 3.94874 0.0 12.1987    
cufflinks 0.633       Low
cufflinks 1.51        
cufflinks 2.788        
cufflinks 2.241        
cufflinks 2.299        
cufflinks 1.21        
cufflinks 2.692        
cufflinks 0.75       Low
cufflinks 3.218        
cufflinks 1.157        
cufflinks 4.861       High
cufflinks 1.54        
cufflinks 3.388       High
cufflinks 1.289        
cufflinks 1.507        
cufflinks 3.93       High
cufflinks 1.021        

0 Strain