Gene : Glyma.15G127700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11649:SF65 - PROTEIN ROOT HAIR DEFECTIVE 3 HOMOLOG 2 Genomic Order:  1277
Name:  ? Glyma.15G127700 Secondary Identifier:  ? PAC:30497560
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G127700 0.5kb upstream 0.5kb upstream 12559 true Chr15: 10145435-10157993 Glycine max
Glyma.15G127700 0.5kb upstream 0.5kb upstream 500 false Chr15: 10145435-10145934 Glycine max
Glyma.15G127700 0.5kb downstream 0.5kb downstream 12559 true Chr15: 10145935-10158493 Glycine max
Glyma.15G127700 0.5kb downstream 0.5kb downstream 500 false Chr15: 10157994-10158493 Glycine max
Glyma.15G127700 1.0kb upstream 1.0kb upstream 13059 true Chr15: 10144935-10157993 Glycine max
Glyma.15G127700 1.0kb upstream 1.0kb upstream 1000 false Chr15: 10144935-10145934 Glycine max
Glyma.15G127700 1.0kb downstream 1.0kb downstream 13059 true Chr15: 10145935-10158993 Glycine max
Glyma.15G127700 1.0kb downstream 1.0kb downstream 1000 false Chr15: 10157994-10158993 Glycine max
Glyma.15G127700 2.0kb upstream 2.0kb upstream 14059 true Chr15: 10143935-10157993 Glycine max
Glyma.15G127700 2.0kb upstream 2.0kb upstream 2000 false Chr15: 10143935-10145934 Glycine max
Glyma.15G127700 2.0kb downstream 2.0kb downstream 14059 true Chr15: 10145935-10159993 Glycine max
Glyma.15G127700 2.0kb downstream 2.0kb downstream 2000 false Chr15: 10157994-10159993 Glycine max
Glyma.15G127700 5.0kb upstream 5.0kb upstream 17059 true Chr15: 10140935-10157993 Glycine max
Glyma.15G127700 5.0kb upstream 5.0kb upstream 5000 false Chr15: 10140935-10145934 Glycine max
Glyma.15G127700 5.0kb downstream 5.0kb downstream 17059 true Chr15: 10145935-10162993 Glycine max
Glyma.15G127700 5.0kb downstream 5.0kb downstream 5000 false Chr15: 10157994-10162993 Glycine max
Glyma.15G127700 10.0kb upstream 10.0kb upstream 22059 true Chr15: 10135935-10157993 Glycine max
Glyma.15G127700 10.0kb upstream 10.0kb upstream 10000 false Chr15: 10135935-10145934 Glycine max
Glyma.15G127700 10.0kb downstream 10.0kb downstream 22059 true Chr15: 10145935-10167993 Glycine max
Glyma.15G127700 10.0kb downstream 10.0kb downstream 10000 false Chr15: 10157994-10167993 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306891 5265 Fabidae View MSA
124037158 5270 Rosid View MSA
123749417 5271 Pentapetalae View MSA
122789407 5272 Eudicot View MSA
122048345 5273 Angiosperm View MSA
121345089 5274 Embryophyte View MSA
123427050 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.0729 0.0 52.9353    
cufflinks 10.0376 0.0 34.2873   Low
cufflinks 20.327 0.0 74.7179 High  
cufflinks 16.9324 0.0 60.2733    
cufflinks 18.5405 0.0 67.0174    
cufflinks 16.1893 0.0 57.329    
cufflinks 23.6179 0.0 88.8526 High High
cufflinks 15.4603 0.0 54.3753    
cufflinks 16.7537 0.0 59.4717    
cufflinks 2.037        
cufflinks 1.545       Low
cufflinks 2.46        
cufflinks 2.555        
cufflinks 2.852       High
cufflinks 1.939        
cufflinks 2.32        
cufflinks 1.605       Low
cufflinks 2.195        
cufflinks 1.529       Low
cufflinks 2.741       High
cufflinks 2.115        
cufflinks 2.353        
cufflinks 1.718        
cufflinks 1.833        
cufflinks 2.637       High
cufflinks 1.711        

0 Strain