Gene : Glyma.15G113100 G. max Wm82.a2.v1
Defline:  (1 of 25) PF05627 - Cleavage site for pathogenic type III effector avirulence factor Avr (AvrRpt-cleavage) Genomic Order:  1131
Name:  ? Glyma.15G113100 Secondary Identifier:  ? PAC:30497300
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G113100 0.5kb upstream 0.5kb upstream 1995 true Chr15: 8907015-8909009 Glycine max
Glyma.15G113100 0.5kb upstream 0.5kb upstream 500 false Chr15: 8907015-8907514 Glycine max
Glyma.15G113100 0.5kb downstream 0.5kb downstream 1995 true Chr15: 8907515-8909509 Glycine max
Glyma.15G113100 0.5kb downstream 0.5kb downstream 500 false Chr15: 8909010-8909509 Glycine max
Glyma.15G113100 1.0kb upstream 1.0kb upstream 2495 true Chr15: 8906515-8909009 Glycine max
Glyma.15G113100 1.0kb upstream 1.0kb upstream 1000 false Chr15: 8906515-8907514 Glycine max
Glyma.15G113100 1.0kb downstream 1.0kb downstream 2495 true Chr15: 8907515-8910009 Glycine max
Glyma.15G113100 1.0kb downstream 1.0kb downstream 1000 false Chr15: 8909010-8910009 Glycine max
Glyma.15G113100 2.0kb upstream 2.0kb upstream 3495 true Chr15: 8905515-8909009 Glycine max
Glyma.15G113100 2.0kb upstream 2.0kb upstream 2000 false Chr15: 8905515-8907514 Glycine max
Glyma.15G113100 2.0kb downstream 2.0kb downstream 3495 true Chr15: 8907515-8911009 Glycine max
Glyma.15G113100 2.0kb downstream 2.0kb downstream 2000 false Chr15: 8909010-8911009 Glycine max
Glyma.15G113100 5.0kb upstream 5.0kb upstream 6495 true Chr15: 8902515-8909009 Glycine max
Glyma.15G113100 5.0kb upstream 5.0kb upstream 5000 false Chr15: 8902515-8907514 Glycine max
Glyma.15G113100 5.0kb downstream 5.0kb downstream 6495 true Chr15: 8907515-8914009 Glycine max
Glyma.15G113100 5.0kb downstream 5.0kb downstream 5000 false Chr15: 8909010-8914009 Glycine max
Glyma.15G113100 10.0kb upstream 10.0kb upstream 11495 true Chr15: 8897515-8909009 Glycine max
Glyma.15G113100 10.0kb upstream 10.0kb upstream 10000 false Chr15: 8897515-8907514 Glycine max
Glyma.15G113100 10.0kb downstream 10.0kb downstream 11495 true Chr15: 8907515-8919009 Glycine max
Glyma.15G113100 10.0kb downstream 10.0kb downstream 10000 false Chr15: 8909010-8919009 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309341 5265 Fabidae View MSA
124074816 5270 Rosid View MSA
123749229 5271 Pentapetalae View MSA
122795391 5272 Eudicot View MSA
122048165 5273 Angiosperm View MSA
121344169 5274 Embryophyte View MSA
123379991 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain