Gene : Glyma.15G114200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13011 - TFIIF-ALPHA Genomic Order:  1142
Name:  ? Glyma.15G114200 Secondary Identifier:  ? PAC:30499458
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G114200 0.5kb upstream 0.5kb upstream 6263 true Chr15: 9001382-9007644 Glycine max
Glyma.15G114200 0.5kb upstream 0.5kb upstream 500 false Chr15: 9007145-9007644 Glycine max
Glyma.15G114200 0.5kb downstream 0.5kb downstream 6263 true Chr15: 9000882-9007144 Glycine max
Glyma.15G114200 0.5kb downstream 0.5kb downstream 500 false Chr15: 9000882-9001381 Glycine max
Glyma.15G114200 1.0kb upstream 1.0kb upstream 6763 true Chr15: 9001382-9008144 Glycine max
Glyma.15G114200 1.0kb upstream 1.0kb upstream 1000 false Chr15: 9007145-9008144 Glycine max
Glyma.15G114200 1.0kb downstream 1.0kb downstream 6763 true Chr15: 9000382-9007144 Glycine max
Glyma.15G114200 1.0kb downstream 1.0kb downstream 1000 false Chr15: 9000382-9001381 Glycine max
Glyma.15G114200 2.0kb upstream 2.0kb upstream 7763 true Chr15: 9001382-9009144 Glycine max
Glyma.15G114200 2.0kb upstream 2.0kb upstream 2000 false Chr15: 9007145-9009144 Glycine max
Glyma.15G114200 2.0kb downstream 2.0kb downstream 7763 true Chr15: 8999382-9007144 Glycine max
Glyma.15G114200 2.0kb downstream 2.0kb downstream 2000 false Chr15: 8999382-9001381 Glycine max
Glyma.15G114200 5.0kb upstream 5.0kb upstream 10763 true Chr15: 9001382-9012144 Glycine max
Glyma.15G114200 5.0kb upstream 5.0kb upstream 5000 false Chr15: 9007145-9012144 Glycine max
Glyma.15G114200 5.0kb downstream 5.0kb downstream 10763 true Chr15: 8996382-9007144 Glycine max
Glyma.15G114200 5.0kb downstream 5.0kb downstream 5000 false Chr15: 8996382-9001381 Glycine max
Glyma.15G114200 10.0kb upstream 10.0kb upstream 15763 true Chr15: 9001382-9017144 Glycine max
Glyma.15G114200 10.0kb upstream 10.0kb upstream 10000 false Chr15: 9007145-9017144 Glycine max
Glyma.15G114200 10.0kb downstream 10.0kb downstream 15763 true Chr15: 8991382-9007144 Glycine max
Glyma.15G114200 10.0kb downstream 10.0kb downstream 10000 false Chr15: 8991382-9001381 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298948 5265 Fabidae View MSA
124061584 5270 Rosid View MSA
123740754 5271 Pentapetalae View MSA
122785795 5272 Eudicot View MSA
122042161 5273 Angiosperm View MSA
121347251 5274 Embryophyte View MSA
123426399 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 25.4696 0.0 105.998 High High
cufflinks 19.6763 0.0 92.5674    
cufflinks 18.6459 0.0 79.1496   Low
cufflinks 21.4672 0.0 101.603 High  
cufflinks 20.2326 0.0 82.8855 High  
cufflinks 21.5753 0.0 87.8656    
cufflinks 21.0138 0.0 98.2648    
cufflinks 20.9834 0.0 98.2692    
cufflinks 19.7803 0.0 83.5919 High  
cufflinks 3.619        
cufflinks 3.34        
cufflinks 4.335        
cufflinks 4.714        
cufflinks 5.151       High
cufflinks 2.599       Low
cufflinks 4.652        
cufflinks 2.661       Low
cufflinks 4.242        
cufflinks 4.034        
cufflinks 4.776        
cufflinks 3.236        
cufflinks 4.983       High
cufflinks 3.962        
cufflinks 3.998        
cufflinks 4.573        
cufflinks 3.664        

0 Strain