Gene : Glyma.15G117500 G. max Wm82.a2.v1
Defline:  (1 of 5) 2.7.8.7 - Holo-[acyl-carrier-protein] synthase / PPTase Genomic Order:  1175
Name:  ? Glyma.15G117500 Secondary Identifier:  ? PAC:30498562
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-6012-1 Glycine max pathologic  

Genomics

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Gene Structure Displayer

Expression

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Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G117500 0.5kb upstream 0.5kb upstream 4776 true Chr15: 9224589-9229364 Glycine max
Glyma.15G117500 0.5kb upstream 0.5kb upstream 500 false Chr15: 9224589-9225088 Glycine max
Glyma.15G117500 0.5kb downstream 0.5kb downstream 4776 true Chr15: 9225089-9229864 Glycine max
Glyma.15G117500 0.5kb downstream 0.5kb downstream 500 false Chr15: 9229365-9229864 Glycine max
Glyma.15G117500 1.0kb upstream 1.0kb upstream 5276 true Chr15: 9224089-9229364 Glycine max
Glyma.15G117500 1.0kb upstream 1.0kb upstream 1000 false Chr15: 9224089-9225088 Glycine max
Glyma.15G117500 1.0kb downstream 1.0kb downstream 5276 true Chr15: 9225089-9230364 Glycine max
Glyma.15G117500 1.0kb downstream 1.0kb downstream 1000 false Chr15: 9229365-9230364 Glycine max
Glyma.15G117500 2.0kb upstream 2.0kb upstream 6276 true Chr15: 9223089-9229364 Glycine max
Glyma.15G117500 2.0kb upstream 2.0kb upstream 2000 false Chr15: 9223089-9225088 Glycine max
Glyma.15G117500 2.0kb downstream 2.0kb downstream 6276 true Chr15: 9225089-9231364 Glycine max
Glyma.15G117500 2.0kb downstream 2.0kb downstream 2000 false Chr15: 9229365-9231364 Glycine max
Glyma.15G117500 5.0kb upstream 5.0kb upstream 9276 true Chr15: 9220089-9229364 Glycine max
Glyma.15G117500 5.0kb upstream 5.0kb upstream 5000 false Chr15: 9220089-9225088 Glycine max
Glyma.15G117500 5.0kb downstream 5.0kb downstream 9276 true Chr15: 9225089-9234364 Glycine max
Glyma.15G117500 5.0kb downstream 5.0kb downstream 5000 false Chr15: 9229365-9234364 Glycine max
Glyma.15G117500 10.0kb upstream 10.0kb upstream 14276 true Chr15: 9215089-9229364 Glycine max
Glyma.15G117500 10.0kb upstream 10.0kb upstream 10000 false Chr15: 9215089-9225088 Glycine max
Glyma.15G117500 10.0kb downstream 10.0kb downstream 14276 true Chr15: 9225089-9239364 Glycine max
Glyma.15G117500 10.0kb downstream 10.0kb downstream 10000 false Chr15: 9229365-9239364 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307205 5265 Fabidae View MSA
124070167 5270 Rosid View MSA
123742618 5271 Pentapetalae View MSA
122794385 5272 Eudicot View MSA
122048448 5273 Angiosperm View MSA
123429078 5275 Viridiplantae View MSA
121348212 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.73473 0.0 28.5892    
cufflinks 2.28471 0.0 18.7387    
cufflinks 5.56093 0.0 38.4618   High
cufflinks 2.87187 0.0 25.7478    
cufflinks 1.7388 0.0 14.6434   Low
cufflinks 2.93544 0.0 21.7523    
cufflinks 1.50601 0.0 11.6771   Low
cufflinks 2.47549 0.0 18.1354    
cufflinks 2.24519 0.0 16.0551    
cufflinks 0.05     Low Low
cufflinks 0.125        
cufflinks 0.125        
cufflinks 0.059     Low  
cufflinks 0.054     Low Low
cufflinks 0.074        
cufflinks 0.1     Low  
cufflinks 0.033     Low Low
cufflinks 0.104     Low  
cufflinks 0.114        
cufflinks 0.121        
cufflinks 0.072        
cufflinks 0.122        
cufflinks 0.103     Low  
cufflinks 0.105        
cufflinks 0.109        
cufflinks 0.045     Low Low

0 Strain