Gene : Glyma.15G118600 G. max Wm82.a2.v1
Defline:  (1 of 8) PTHR10343:SF51 - SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-1 Genomic Order:  1186
Name:  ? Glyma.15G118600 Secondary Identifier:  ? PAC:30496671
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G118600 0.5kb upstream 0.5kb upstream 3616 true Chr15: 9305534-9309149 Glycine max
Glyma.15G118600 0.5kb upstream 0.5kb upstream 500 false Chr15: 9308650-9309149 Glycine max
Glyma.15G118600 0.5kb downstream 0.5kb downstream 3616 true Chr15: 9305034-9308649 Glycine max
Glyma.15G118600 0.5kb downstream 0.5kb downstream 500 false Chr15: 9305034-9305533 Glycine max
Glyma.15G118600 1.0kb upstream 1.0kb upstream 4116 true Chr15: 9305534-9309649 Glycine max
Glyma.15G118600 1.0kb upstream 1.0kb upstream 1000 false Chr15: 9308650-9309649 Glycine max
Glyma.15G118600 1.0kb downstream 1.0kb downstream 4116 true Chr15: 9304534-9308649 Glycine max
Glyma.15G118600 1.0kb downstream 1.0kb downstream 1000 false Chr15: 9304534-9305533 Glycine max
Glyma.15G118600 2.0kb upstream 2.0kb upstream 5116 true Chr15: 9305534-9310649 Glycine max
Glyma.15G118600 2.0kb upstream 2.0kb upstream 2000 false Chr15: 9308650-9310649 Glycine max
Glyma.15G118600 2.0kb downstream 2.0kb downstream 5116 true Chr15: 9303534-9308649 Glycine max
Glyma.15G118600 2.0kb downstream 2.0kb downstream 2000 false Chr15: 9303534-9305533 Glycine max
Glyma.15G118600 5.0kb upstream 5.0kb upstream 8116 true Chr15: 9305534-9313649 Glycine max
Glyma.15G118600 5.0kb upstream 5.0kb upstream 5000 false Chr15: 9308650-9313649 Glycine max
Glyma.15G118600 5.0kb downstream 5.0kb downstream 8116 true Chr15: 9300534-9308649 Glycine max
Glyma.15G118600 5.0kb downstream 5.0kb downstream 5000 false Chr15: 9300534-9305533 Glycine max
Glyma.15G118600 10.0kb upstream 10.0kb upstream 13116 true Chr15: 9305534-9318649 Glycine max
Glyma.15G118600 10.0kb upstream 10.0kb upstream 10000 false Chr15: 9308650-9318649 Glycine max
Glyma.15G118600 10.0kb downstream 10.0kb downstream 13116 true Chr15: 9295534-9308649 Glycine max
Glyma.15G118600 10.0kb downstream 10.0kb downstream 10000 false Chr15: 9295534-9305533 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308505 5265 Fabidae View MSA
124063365 5270 Rosid View MSA
123740870 5271 Pentapetalae View MSA
122792277 5272 Eudicot View MSA
122041753 5273 Angiosperm View MSA
121345261 5274 Embryophyte View MSA
123426874 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.27181 0.0 18.2814    
cufflinks 13.0468 0.0 35.4579    
cufflinks 3.39092 0.0 10.7485   Low
cufflinks 19.3425 0.0 51.7099    
cufflinks 9.80723 0.0 27.2396    
cufflinks 2.98493 0.0 9.66323   Low
cufflinks 36.6078 0.0 98.5915 High High
cufflinks 10.5174 0.0 28.9894    
cufflinks 8.80112 0.0 24.6829    
cufflinks 3.612        
cufflinks 0.788       Low
cufflinks 2.291        
cufflinks 1.968        
cufflinks 2.392        
cufflinks 1.651        
cufflinks 3.64        
cufflinks 1.863        
cufflinks 4.167       High
cufflinks 3.706        
cufflinks 4.033       High
cufflinks 1.1       Low
cufflinks 4.138       High
cufflinks 3.248        
cufflinks 1.138       Low
cufflinks 3.624        
cufflinks 1.296       Low

0 Strain