Gene : Glyma.15G121700 G. max Wm82.a2.v1
Defline:  (1 of 77) PF03000 - NPH3 family (NPH3) Genomic Order:  1217
Name:  ? Glyma.15G121700 Secondary Identifier:  ? PAC:30499053
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G121700 0.5kb upstream 0.5kb upstream 8144 true Chr15: 9626359-9634502 Glycine max
Glyma.15G121700 0.5kb upstream 0.5kb upstream 500 false Chr15: 9626359-9626858 Glycine max
Glyma.15G121700 0.5kb downstream 0.5kb downstream 8144 true Chr15: 9626859-9635002 Glycine max
Glyma.15G121700 0.5kb downstream 0.5kb downstream 500 false Chr15: 9634503-9635002 Glycine max
Glyma.15G121700 1.0kb upstream 1.0kb upstream 8644 true Chr15: 9625859-9634502 Glycine max
Glyma.15G121700 1.0kb upstream 1.0kb upstream 1000 false Chr15: 9625859-9626858 Glycine max
Glyma.15G121700 1.0kb downstream 1.0kb downstream 8644 true Chr15: 9626859-9635502 Glycine max
Glyma.15G121700 1.0kb downstream 1.0kb downstream 1000 false Chr15: 9634503-9635502 Glycine max
Glyma.15G121700 2.0kb upstream 2.0kb upstream 9644 true Chr15: 9624859-9634502 Glycine max
Glyma.15G121700 2.0kb upstream 2.0kb upstream 2000 false Chr15: 9624859-9626858 Glycine max
Glyma.15G121700 2.0kb downstream 2.0kb downstream 9644 true Chr15: 9626859-9636502 Glycine max
Glyma.15G121700 2.0kb downstream 2.0kb downstream 2000 false Chr15: 9634503-9636502 Glycine max
Glyma.15G121700 5.0kb upstream 5.0kb upstream 12644 true Chr15: 9621859-9634502 Glycine max
Glyma.15G121700 5.0kb upstream 5.0kb upstream 5000 false Chr15: 9621859-9626858 Glycine max
Glyma.15G121700 5.0kb downstream 5.0kb downstream 12644 true Chr15: 9626859-9639502 Glycine max
Glyma.15G121700 5.0kb downstream 5.0kb downstream 5000 false Chr15: 9634503-9639502 Glycine max
Glyma.15G121700 10.0kb upstream 10.0kb upstream 17644 true Chr15: 9616859-9634502 Glycine max
Glyma.15G121700 10.0kb upstream 10.0kb upstream 10000 false Chr15: 9616859-9626858 Glycine max
Glyma.15G121700 10.0kb downstream 10.0kb downstream 17644 true Chr15: 9626859-9644502 Glycine max
Glyma.15G121700 10.0kb downstream 10.0kb downstream 10000 false Chr15: 9634503-9644502 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026454 5273 Angiosperm View MSA
122313072 5265 Fabidae View MSA
124067148 5270 Rosid View MSA
123737998 5271 Pentapetalae View MSA
122789015 5272 Eudicot View MSA
121296339 5274 Embryophyte View MSA
123334520 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.32128 0.0 1.53883   Low
cufflinks 3.4775 0.0 14.0271    
cufflinks 0.541333 0.0 3.06988    
cufflinks 1.55417 0.0 8.27866    
cufflinks 0.779686 0.0 4.29581    
cufflinks 0.269457 0.0 1.32065 Low Low
cufflinks 14.2867 0.0 53.8986   High
cufflinks 15.1261 0.0 57.463   High
cufflinks 1.27229 0.0 4.67033    
cufflinks 0.943       High
cufflinks 0.071        
cufflinks 0.185        
cufflinks 0.089     Low  
cufflinks 0.03     Low Low
cufflinks 0.007     Low Low
cufflinks 0.071     Low  
cufflinks 0.244        
cufflinks 0.151        
cufflinks 0.539       High
cufflinks 0.053     Low  
cufflinks 0.074        
cufflinks 0.077     Low  
cufflinks 0.049     Low  
cufflinks 0.126        
cufflinks 0.068     Low  
cufflinks 0.207        

0 Strain