Gene : Glyma.15G106900 G. max Wm82.a2.v1
Defline:  (1 of 8) PTHR24012:SF333 - POLYADENYLATE-BINDING PROTEIN RBP45B-RELATED Genomic Order:  1069
Name:  ? Glyma.15G106900 Secondary Identifier:  ? PAC:30496816
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G106900 0.5kb upstream 0.5kb upstream 4805 true Chr15: 8373833-8378637 Glycine max
Glyma.15G106900 0.5kb upstream 0.5kb upstream 500 false Chr15: 8373833-8374332 Glycine max
Glyma.15G106900 0.5kb downstream 0.5kb downstream 4805 true Chr15: 8374333-8379137 Glycine max
Glyma.15G106900 0.5kb downstream 0.5kb downstream 500 false Chr15: 8378638-8379137 Glycine max
Glyma.15G106900 1.0kb upstream 1.0kb upstream 5305 true Chr15: 8373333-8378637 Glycine max
Glyma.15G106900 1.0kb upstream 1.0kb upstream 1000 false Chr15: 8373333-8374332 Glycine max
Glyma.15G106900 1.0kb downstream 1.0kb downstream 5305 true Chr15: 8374333-8379637 Glycine max
Glyma.15G106900 1.0kb downstream 1.0kb downstream 1000 false Chr15: 8378638-8379637 Glycine max
Glyma.15G106900 2.0kb upstream 2.0kb upstream 6305 true Chr15: 8372333-8378637 Glycine max
Glyma.15G106900 2.0kb upstream 2.0kb upstream 2000 false Chr15: 8372333-8374332 Glycine max
Glyma.15G106900 2.0kb downstream 2.0kb downstream 6305 true Chr15: 8374333-8380637 Glycine max
Glyma.15G106900 2.0kb downstream 2.0kb downstream 2000 false Chr15: 8378638-8380637 Glycine max
Glyma.15G106900 5.0kb upstream 5.0kb upstream 9305 true Chr15: 8369333-8378637 Glycine max
Glyma.15G106900 5.0kb upstream 5.0kb upstream 5000 false Chr15: 8369333-8374332 Glycine max
Glyma.15G106900 5.0kb downstream 5.0kb downstream 9305 true Chr15: 8374333-8383637 Glycine max
Glyma.15G106900 5.0kb downstream 5.0kb downstream 5000 false Chr15: 8378638-8383637 Glycine max
Glyma.15G106900 10.0kb upstream 10.0kb upstream 14305 true Chr15: 8364333-8378637 Glycine max
Glyma.15G106900 10.0kb upstream 10.0kb upstream 10000 false Chr15: 8364333-8374332 Glycine max
Glyma.15G106900 10.0kb downstream 10.0kb downstream 14305 true Chr15: 8374333-8388637 Glycine max
Glyma.15G106900 10.0kb downstream 10.0kb downstream 10000 false Chr15: 8378638-8388637 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314408 5265 Fabidae View MSA
124066893 5270 Rosid View MSA
123742056 5271 Pentapetalae View MSA
122786744 5272 Eudicot View MSA
122051452 5273 Angiosperm View MSA
121351371 5274 Embryophyte View MSA
123424048 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 87.0173 0.0 263.77 High  
cufflinks 45.2727 0.0 125.631 High Low
cufflinks 91.1154 0.0 277.261 High  
cufflinks 46.1052 0.0 128.254 High Low
cufflinks 97.2431 0.0 301.052 High  
cufflinks 69.4926 0.0 203.642 High  
cufflinks 115.884 0.0 369.096 High High
cufflinks 69.4284 0.0 203.022 High  
cufflinks 73.7318 0.0 217.749 High  
cufflinks 16.292     High Low
cufflinks 41.24     High High
cufflinks 22.832     High  
cufflinks 31.276     High  
cufflinks 34.833     High  
cufflinks 41.357     High High
cufflinks 29.528     High  
cufflinks 22.402     High  
cufflinks 15.737     High Low
cufflinks 20.269     High Low
cufflinks 29.441     High  
cufflinks 34.797     High  
cufflinks 26.075     High  
cufflinks 21.323     High  
cufflinks 36.621     High  
cufflinks 29.515     High  
cufflinks 30.678     High  

0 Strain