Gene : Glyma.15G110700 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10146 - PROLINE SYNTHETASE CO-TRANSCRIBED BACTERIAL HOMOLOG PROTEIN Genomic Order:  1107
Name:  ? Glyma.15G110700 Secondary Identifier:  ? PAC:30499317
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G110700 0.5kb upstream 0.5kb upstream 3056 true Chr15: 8682158-8685213 Glycine max
Glyma.15G110700 0.5kb upstream 0.5kb upstream 500 false Chr15: 8682158-8682657 Glycine max
Glyma.15G110700 0.5kb downstream 0.5kb downstream 3056 true Chr15: 8682658-8685713 Glycine max
Glyma.15G110700 0.5kb downstream 0.5kb downstream 500 false Chr15: 8685214-8685713 Glycine max
Glyma.15G110700 1.0kb upstream 1.0kb upstream 3556 true Chr15: 8681658-8685213 Glycine max
Glyma.15G110700 1.0kb upstream 1.0kb upstream 1000 false Chr15: 8681658-8682657 Glycine max
Glyma.15G110700 1.0kb downstream 1.0kb downstream 3556 true Chr15: 8682658-8686213 Glycine max
Glyma.15G110700 1.0kb downstream 1.0kb downstream 1000 false Chr15: 8685214-8686213 Glycine max
Glyma.15G110700 2.0kb upstream 2.0kb upstream 4556 true Chr15: 8680658-8685213 Glycine max
Glyma.15G110700 2.0kb upstream 2.0kb upstream 2000 false Chr15: 8680658-8682657 Glycine max
Glyma.15G110700 2.0kb downstream 2.0kb downstream 4556 true Chr15: 8682658-8687213 Glycine max
Glyma.15G110700 2.0kb downstream 2.0kb downstream 2000 false Chr15: 8685214-8687213 Glycine max
Glyma.15G110700 5.0kb upstream 5.0kb upstream 7556 true Chr15: 8677658-8685213 Glycine max
Glyma.15G110700 5.0kb upstream 5.0kb upstream 5000 false Chr15: 8677658-8682657 Glycine max
Glyma.15G110700 5.0kb downstream 5.0kb downstream 7556 true Chr15: 8682658-8690213 Glycine max
Glyma.15G110700 5.0kb downstream 5.0kb downstream 5000 false Chr15: 8685214-8690213 Glycine max
Glyma.15G110700 10.0kb upstream 10.0kb upstream 12556 true Chr15: 8672658-8685213 Glycine max
Glyma.15G110700 10.0kb upstream 10.0kb upstream 10000 false Chr15: 8672658-8682657 Glycine max
Glyma.15G110700 10.0kb downstream 10.0kb downstream 12556 true Chr15: 8682658-8695213 Glycine max
Glyma.15G110700 10.0kb downstream 10.0kb downstream 10000 false Chr15: 8685214-8695213 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311369 5265 Fabidae View MSA
124066747 5270 Rosid View MSA
123741353 5271 Pentapetalae View MSA
122795077 5272 Eudicot View MSA
122042316 5273 Angiosperm View MSA
121344237 5274 Embryophyte View MSA
123424021 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.25019 0.0 13.4097    
cufflinks 6.82114 0.0 20.1124    
cufflinks 3.42378 0.0 11.1114   Low
cufflinks 13.219 0.0 36.2884    
cufflinks 52.5375 0.0 143.255 High High
cufflinks 21.2165 0.0 56.8258    
cufflinks 17.0729 0.0 46.1884    
cufflinks 4.81376 0.0 14.8771    
cufflinks 165.057 0.0 521.637 High High
cufflinks 2.48        
cufflinks 10.757     High  
cufflinks 3.377        
cufflinks 13.952     High High
cufflinks 18.679     High High
cufflinks 62.708     High High
cufflinks 2.091        
cufflinks 2.67        
cufflinks 4.381        
cufflinks 2.136        
cufflinks 1.757        
cufflinks 12.178     High  
cufflinks 1.288       Low
cufflinks 0.922       Low
cufflinks 5.346        
cufflinks 1.954        
cufflinks 7.278     High  

0 Strain