Gene : Glyma.15G111000 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR31042:SF2 - CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN Genomic Order:  1110
Name:  ? Glyma.15G111000 Secondary Identifier:  ? PAC:30496439
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G111000 0.5kb upstream 0.5kb upstream 5915 true Chr15: 8692505-8698419 Glycine max
Glyma.15G111000 0.5kb upstream 0.5kb upstream 500 false Chr15: 8697920-8698419 Glycine max
Glyma.15G111000 0.5kb downstream 0.5kb downstream 5915 true Chr15: 8692005-8697919 Glycine max
Glyma.15G111000 0.5kb downstream 0.5kb downstream 500 false Chr15: 8692005-8692504 Glycine max
Glyma.15G111000 1.0kb upstream 1.0kb upstream 6415 true Chr15: 8692505-8698919 Glycine max
Glyma.15G111000 1.0kb upstream 1.0kb upstream 1000 false Chr15: 8697920-8698919 Glycine max
Glyma.15G111000 1.0kb downstream 1.0kb downstream 6415 true Chr15: 8691505-8697919 Glycine max
Glyma.15G111000 1.0kb downstream 1.0kb downstream 1000 false Chr15: 8691505-8692504 Glycine max
Glyma.15G111000 2.0kb upstream 2.0kb upstream 7415 true Chr15: 8692505-8699919 Glycine max
Glyma.15G111000 2.0kb upstream 2.0kb upstream 2000 false Chr15: 8697920-8699919 Glycine max
Glyma.15G111000 2.0kb downstream 2.0kb downstream 7415 true Chr15: 8690505-8697919 Glycine max
Glyma.15G111000 2.0kb downstream 2.0kb downstream 2000 false Chr15: 8690505-8692504 Glycine max
Glyma.15G111000 5.0kb upstream 5.0kb upstream 10415 true Chr15: 8692505-8702919 Glycine max
Glyma.15G111000 5.0kb upstream 5.0kb upstream 5000 false Chr15: 8697920-8702919 Glycine max
Glyma.15G111000 5.0kb downstream 5.0kb downstream 10415 true Chr15: 8687505-8697919 Glycine max
Glyma.15G111000 5.0kb downstream 5.0kb downstream 5000 false Chr15: 8687505-8692504 Glycine max
Glyma.15G111000 10.0kb upstream 10.0kb upstream 15415 true Chr15: 8692505-8707919 Glycine max
Glyma.15G111000 10.0kb upstream 10.0kb upstream 10000 false Chr15: 8697920-8707919 Glycine max
Glyma.15G111000 10.0kb downstream 10.0kb downstream 15415 true Chr15: 8682505-8697919 Glycine max
Glyma.15G111000 10.0kb downstream 10.0kb downstream 10000 false Chr15: 8682505-8692504 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299648 5265 Fabidae View MSA
124066667 5270 Rosid View MSA
123753722 5271 Pentapetalae View MSA
122788010 5272 Eudicot View MSA
122051448 5273 Angiosperm View MSA
121351490 5274 Embryophyte View MSA
123428085 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.67809 0.0 11.702    
cufflinks 1.45707 0.0 7.64311   Low
cufflinks 2.30152 0.0 7.89949    
cufflinks 2.08545 0.0 7.45913    
cufflinks 8.51365 0.0 31.6649   High
cufflinks 3.59056 0.0 14.327    
cufflinks 2.05301 0.0 7.45287    
cufflinks 2.39115 0.0 8.2102    
cufflinks 3.82254 0.0 14.6284    
cufflinks 0.564        
cufflinks 0.134       Low
cufflinks 0.536        
cufflinks 1.65       High
cufflinks 2.504       High
cufflinks 0.131       Low
cufflinks 0.354        
cufflinks 0.599        
cufflinks 0.681        
cufflinks 0.523        
cufflinks 0.402        
cufflinks 0.195        
cufflinks 0.395        
cufflinks 0.384        
cufflinks 0.174       Low
cufflinks 0.299        
cufflinks 0.422        

0 Strain