Gene : Glyma.15G111600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR27001:SF21 - PROTEIN STRUBBELIG-RECEPTOR FAMILY 6-RELATED Genomic Order:  1116
Name:  ? Glyma.15G111600 Secondary Identifier:  ? PAC:30498070
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G111600 0.5kb upstream 0.5kb upstream 7393 true Chr15: 8743033-8750425 Glycine max
Glyma.15G111600 0.5kb upstream 0.5kb upstream 500 false Chr15: 8743033-8743532 Glycine max
Glyma.15G111600 0.5kb downstream 0.5kb downstream 7393 true Chr15: 8743533-8750925 Glycine max
Glyma.15G111600 0.5kb downstream 0.5kb downstream 500 false Chr15: 8750426-8750925 Glycine max
Glyma.15G111600 1.0kb upstream 1.0kb upstream 7893 true Chr15: 8742533-8750425 Glycine max
Glyma.15G111600 1.0kb upstream 1.0kb upstream 1000 false Chr15: 8742533-8743532 Glycine max
Glyma.15G111600 1.0kb downstream 1.0kb downstream 7893 true Chr15: 8743533-8751425 Glycine max
Glyma.15G111600 1.0kb downstream 1.0kb downstream 1000 false Chr15: 8750426-8751425 Glycine max
Glyma.15G111600 2.0kb upstream 2.0kb upstream 8893 true Chr15: 8741533-8750425 Glycine max
Glyma.15G111600 2.0kb upstream 2.0kb upstream 2000 false Chr15: 8741533-8743532 Glycine max
Glyma.15G111600 2.0kb downstream 2.0kb downstream 8893 true Chr15: 8743533-8752425 Glycine max
Glyma.15G111600 2.0kb downstream 2.0kb downstream 2000 false Chr15: 8750426-8752425 Glycine max
Glyma.15G111600 5.0kb upstream 5.0kb upstream 11893 true Chr15: 8738533-8750425 Glycine max
Glyma.15G111600 5.0kb upstream 5.0kb upstream 5000 false Chr15: 8738533-8743532 Glycine max
Glyma.15G111600 5.0kb downstream 5.0kb downstream 11893 true Chr15: 8743533-8755425 Glycine max
Glyma.15G111600 5.0kb downstream 5.0kb downstream 5000 false Chr15: 8750426-8755425 Glycine max
Glyma.15G111600 10.0kb upstream 10.0kb upstream 16893 true Chr15: 8733533-8750425 Glycine max
Glyma.15G111600 10.0kb upstream 10.0kb upstream 10000 false Chr15: 8733533-8743532 Glycine max
Glyma.15G111600 10.0kb downstream 10.0kb downstream 16893 true Chr15: 8743533-8760425 Glycine max
Glyma.15G111600 10.0kb downstream 10.0kb downstream 10000 false Chr15: 8750426-8760425 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303725 5265 Fabidae View MSA
124068961 5270 Rosid View MSA
123745097 5271 Pentapetalae View MSA
122791494 5272 Eudicot View MSA
122051467 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121348233 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.95087 0.0 6.14297   Low
cufflinks 10.8492 0.0 28.9863    
cufflinks 2.3079 0.0 7.0797   Low
cufflinks 22.2881 0.0 60.4393 High High
cufflinks 13.4935 0.0 36.0034    
cufflinks 6.29441 0.0 17.2108    
cufflinks 21.7556 0.0 58.8557 High High
cufflinks 11.765 0.0 31.3982    
cufflinks 6.71442 0.0 18.2846    
cufflinks 5.782       High
cufflinks 0.381       Low
cufflinks 2.13        
cufflinks 5.965       High
cufflinks 5.496       High
cufflinks 0.257       Low
cufflinks 1.464        
cufflinks 1.241        
cufflinks 4.306       High
cufflinks 4.698       High
cufflinks 0.879        
cufflinks 0.795        
cufflinks 1.557        
cufflinks 1.441        
cufflinks 0.44       Low
cufflinks 1.028        
cufflinks 1.425        

0 Strain