Gene : Glyma.15G111900 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11850:SF100 - HOMEOBOX PROTEIN SHOOT MERISTEMLESS Genomic Order:  1119
Name:  ? Glyma.15G111900 Secondary Identifier:  ? PAC:30496626
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G111900 0.5kb upstream 0.5kb upstream 8410 true Chr15: 8769366-8777775 Glycine max
Glyma.15G111900 0.5kb upstream 0.5kb upstream 500 false Chr15: 8777276-8777775 Glycine max
Glyma.15G111900 0.5kb downstream 0.5kb downstream 8410 true Chr15: 8768866-8777275 Glycine max
Glyma.15G111900 0.5kb downstream 0.5kb downstream 500 false Chr15: 8768866-8769365 Glycine max
Glyma.15G111900 1.0kb upstream 1.0kb upstream 8910 true Chr15: 8769366-8778275 Glycine max
Glyma.15G111900 1.0kb upstream 1.0kb upstream 1000 false Chr15: 8777276-8778275 Glycine max
Glyma.15G111900 1.0kb downstream 1.0kb downstream 8910 true Chr15: 8768366-8777275 Glycine max
Glyma.15G111900 1.0kb downstream 1.0kb downstream 1000 false Chr15: 8768366-8769365 Glycine max
Glyma.15G111900 2.0kb upstream 2.0kb upstream 9910 true Chr15: 8769366-8779275 Glycine max
Glyma.15G111900 2.0kb upstream 2.0kb upstream 2000 false Chr15: 8777276-8779275 Glycine max
Glyma.15G111900 2.0kb downstream 2.0kb downstream 9910 true Chr15: 8767366-8777275 Glycine max
Glyma.15G111900 2.0kb downstream 2.0kb downstream 2000 false Chr15: 8767366-8769365 Glycine max
Glyma.15G111900 5.0kb upstream 5.0kb upstream 12910 true Chr15: 8769366-8782275 Glycine max
Glyma.15G111900 5.0kb upstream 5.0kb upstream 5000 false Chr15: 8777276-8782275 Glycine max
Glyma.15G111900 5.0kb downstream 5.0kb downstream 12910 true Chr15: 8764366-8777275 Glycine max
Glyma.15G111900 5.0kb downstream 5.0kb downstream 5000 false Chr15: 8764366-8769365 Glycine max
Glyma.15G111900 10.0kb upstream 10.0kb upstream 17910 true Chr15: 8769366-8787275 Glycine max
Glyma.15G111900 10.0kb upstream 10.0kb upstream 10000 false Chr15: 8777276-8787275 Glycine max
Glyma.15G111900 10.0kb downstream 10.0kb downstream 17910 true Chr15: 8759366-8777275 Glycine max
Glyma.15G111900 10.0kb downstream 10.0kb downstream 10000 false Chr15: 8759366-8769365 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313225 5265 Fabidae View MSA
124072037 5270 Rosid View MSA
123750536 5271 Pentapetalae View MSA
122794934 5272 Eudicot View MSA
122051072 5273 Angiosperm View MSA
121351483 5274 Embryophyte View MSA
123428758 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.00866469 0.0 0.0448644 Low Low
cufflinks 2.44854 0.0 9.80143    
cufflinks 4.59947 0.0 15.1579    
cufflinks 0.255957 0.0 1.66495    
cufflinks 2.495 0.0 10.1042    
cufflinks 0.266993 0.0 1.29857 Low  
cufflinks 0.314982 0.0 1.54801    
cufflinks 8.7061 0.0 30.4155   High
cufflinks 0.832778 0.0 3.49623    
cufflinks 0.739        
cufflinks 0.001     Low Low
cufflinks 1.341        
cufflinks 0.037     Low  
cufflinks 0.19        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.047     Low  
cufflinks 1.197        
cufflinks 0.235        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain