Gene : Glyma.15G112500 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR31906:SF5 - PLASTID-LIPID-ASSOCIATED PROTEIN 3, CHLOROPLASTIC-RELATED Genomic Order:  1125
Name:  ? Glyma.15G112500 Secondary Identifier:  ? PAC:30498177
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G112500 0.5kb upstream 0.5kb upstream 3114 true Chr15: 8855605-8858718 Glycine max
Glyma.15G112500 0.5kb upstream 0.5kb upstream 500 false Chr15: 8858219-8858718 Glycine max
Glyma.15G112500 0.5kb downstream 0.5kb downstream 3114 true Chr15: 8855105-8858218 Glycine max
Glyma.15G112500 0.5kb downstream 0.5kb downstream 500 false Chr15: 8855105-8855604 Glycine max
Glyma.15G112500 1.0kb upstream 1.0kb upstream 3614 true Chr15: 8855605-8859218 Glycine max
Glyma.15G112500 1.0kb upstream 1.0kb upstream 1000 false Chr15: 8858219-8859218 Glycine max
Glyma.15G112500 1.0kb downstream 1.0kb downstream 3614 true Chr15: 8854605-8858218 Glycine max
Glyma.15G112500 1.0kb downstream 1.0kb downstream 1000 false Chr15: 8854605-8855604 Glycine max
Glyma.15G112500 2.0kb upstream 2.0kb upstream 4614 true Chr15: 8855605-8860218 Glycine max
Glyma.15G112500 2.0kb upstream 2.0kb upstream 2000 false Chr15: 8858219-8860218 Glycine max
Glyma.15G112500 2.0kb downstream 2.0kb downstream 4614 true Chr15: 8853605-8858218 Glycine max
Glyma.15G112500 2.0kb downstream 2.0kb downstream 2000 false Chr15: 8853605-8855604 Glycine max
Glyma.15G112500 5.0kb upstream 5.0kb upstream 7614 true Chr15: 8855605-8863218 Glycine max
Glyma.15G112500 5.0kb upstream 5.0kb upstream 5000 false Chr15: 8858219-8863218 Glycine max
Glyma.15G112500 5.0kb downstream 5.0kb downstream 7614 true Chr15: 8850605-8858218 Glycine max
Glyma.15G112500 5.0kb downstream 5.0kb downstream 5000 false Chr15: 8850605-8855604 Glycine max
Glyma.15G112500 10.0kb upstream 10.0kb upstream 12614 true Chr15: 8855605-8868218 Glycine max
Glyma.15G112500 10.0kb upstream 10.0kb upstream 10000 false Chr15: 8858219-8868218 Glycine max
Glyma.15G112500 10.0kb downstream 10.0kb downstream 12614 true Chr15: 8845605-8858218 Glycine max
Glyma.15G112500 10.0kb downstream 10.0kb downstream 10000 false Chr15: 8845605-8855604 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303494 5265 Fabidae View MSA
124073246 5270 Rosid View MSA
123747312 5271 Pentapetalae View MSA
122796946 5272 Eudicot View MSA
122048215 5273 Angiosperm View MSA
121346450 5274 Embryophyte View MSA
123427802 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 149.751 0.0 487.347 High High
cufflinks 10.1738 0.0 27.9709    
cufflinks 85.8689 0.0 252.57 High High
cufflinks 3.01327 0.0 9.62169    
cufflinks 3.02653 0.0 9.62071    
cufflinks 39.8664 0.0 108.457 High  
cufflinks 2.39601 0.0 7.89521    
cufflinks 3.76284 0.0 11.6292    
cufflinks 2.92521 0.0 9.36401    
cufflinks 0.599        
cufflinks 1.81        
cufflinks 28.578     High High
cufflinks 0.754        
cufflinks 0.717        
cufflinks 0.339       Low
cufflinks 1.075        
cufflinks 1.474        
cufflinks 5.035       High
cufflinks 6.388       High
cufflinks 0.583        
cufflinks 1.325        
cufflinks 1.212        
cufflinks 0.797        
cufflinks 3.248        
cufflinks 0.738        
cufflinks 1.008        

0 Strain