Gene : Glyma.15G158400 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR10497 - 60S RIBOSOMAL PROTEIN L27 Genomic Order:  1584
Name:  ? Glyma.15G158400 Secondary Identifier:  ? PAC:30497442
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G158400 0.5kb upstream 0.5kb upstream 1326 true Chr15: 13280487-13281812 Glycine max
Glyma.15G158400 0.5kb upstream 0.5kb upstream 500 false Chr15: 13280487-13280986 Glycine max
Glyma.15G158400 0.5kb downstream 0.5kb downstream 1326 true Chr15: 13280987-13282312 Glycine max
Glyma.15G158400 0.5kb downstream 0.5kb downstream 500 false Chr15: 13281813-13282312 Glycine max
Glyma.15G158400 1.0kb upstream 1.0kb upstream 1826 true Chr15: 13279987-13281812 Glycine max
Glyma.15G158400 1.0kb upstream 1.0kb upstream 1000 false Chr15: 13279987-13280986 Glycine max
Glyma.15G158400 1.0kb downstream 1.0kb downstream 1826 true Chr15: 13280987-13282812 Glycine max
Glyma.15G158400 1.0kb downstream 1.0kb downstream 1000 false Chr15: 13281813-13282812 Glycine max
Glyma.15G158400 2.0kb upstream 2.0kb upstream 2826 true Chr15: 13278987-13281812 Glycine max
Glyma.15G158400 2.0kb upstream 2.0kb upstream 2000 false Chr15: 13278987-13280986 Glycine max
Glyma.15G158400 2.0kb downstream 2.0kb downstream 2826 true Chr15: 13280987-13283812 Glycine max
Glyma.15G158400 2.0kb downstream 2.0kb downstream 2000 false Chr15: 13281813-13283812 Glycine max
Glyma.15G158400 5.0kb upstream 5.0kb upstream 5826 true Chr15: 13275987-13281812 Glycine max
Glyma.15G158400 5.0kb upstream 5.0kb upstream 5000 false Chr15: 13275987-13280986 Glycine max
Glyma.15G158400 5.0kb downstream 5.0kb downstream 5826 true Chr15: 13280987-13286812 Glycine max
Glyma.15G158400 5.0kb downstream 5.0kb downstream 5000 false Chr15: 13281813-13286812 Glycine max
Glyma.15G158400 10.0kb upstream 10.0kb upstream 10826 true Chr15: 13270987-13281812 Glycine max
Glyma.15G158400 10.0kb upstream 10.0kb upstream 10000 false Chr15: 13270987-13280986 Glycine max
Glyma.15G158400 10.0kb downstream 10.0kb downstream 10826 true Chr15: 13280987-13291812 Glycine max
Glyma.15G158400 10.0kb downstream 10.0kb downstream 10000 false Chr15: 13281813-13291812 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299688 5265 Fabidae View MSA
124065262 5270 Rosid View MSA
123741736 5271 Pentapetalae View MSA
122786015 5272 Eudicot View MSA
122045020 5273 Angiosperm View MSA
121345737 5274 Embryophyte View MSA
123427909 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 68.9852 0.0 186.402 High  
cufflinks 100.491 0.0 279.243 High  
cufflinks 38.2177 0.0 102.068 High Low
cufflinks 45.1318 0.0 120.428 High Low
cufflinks 197.903 0.0 604.499 High  
cufflinks 184.257 0.0 554.052 High  
cufflinks 242.19 0.0 764.765 High High
cufflinks 101.899 0.0 283.363 High  
cufflinks 127.303 0.0 363.592 High  
cufflinks 83.899     High  
cufflinks 25.72     High Low
cufflinks 46.136     High  
cufflinks 222.02     High High
cufflinks 358.023     High High
cufflinks 16.914     High Low
cufflinks 59.327     High  
cufflinks 60.951     High  
cufflinks 48.623     High  
cufflinks 80.448     High  
cufflinks 37.879     High  
cufflinks 43.276     High  
cufflinks 42.616     High  
cufflinks 71.332     High  
cufflinks 32.1     High  
cufflinks 51.409     High  
cufflinks 63.501     High  

0 Strain