Gene : Glyma.15G160400 G. max Wm82.a2.v1
Defline:  (1 of 56) PF12796//PF13962 - Ankyrin repeats (3 copies) (Ank_2) // Domain of unknown function (PGG) Genomic Order:  1604
Name:  ? Glyma.15G160400 Secondary Identifier:  ? PAC:30495968
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G160400 0.5kb upstream 0.5kb upstream 7231 true Chr15: 13595805-13603035 Glycine max
Glyma.15G160400 0.5kb upstream 0.5kb upstream 500 false Chr15: 13602536-13603035 Glycine max
Glyma.15G160400 0.5kb downstream 0.5kb downstream 7231 true Chr15: 13595305-13602535 Glycine max
Glyma.15G160400 0.5kb downstream 0.5kb downstream 500 false Chr15: 13595305-13595804 Glycine max
Glyma.15G160400 1.0kb upstream 1.0kb upstream 7731 true Chr15: 13595805-13603535 Glycine max
Glyma.15G160400 1.0kb upstream 1.0kb upstream 1000 false Chr15: 13602536-13603535 Glycine max
Glyma.15G160400 1.0kb downstream 1.0kb downstream 7731 true Chr15: 13594805-13602535 Glycine max
Glyma.15G160400 1.0kb downstream 1.0kb downstream 1000 false Chr15: 13594805-13595804 Glycine max
Glyma.15G160400 2.0kb upstream 2.0kb upstream 8731 true Chr15: 13595805-13604535 Glycine max
Glyma.15G160400 2.0kb upstream 2.0kb upstream 2000 false Chr15: 13602536-13604535 Glycine max
Glyma.15G160400 2.0kb downstream 2.0kb downstream 8731 true Chr15: 13593805-13602535 Glycine max
Glyma.15G160400 2.0kb downstream 2.0kb downstream 2000 false Chr15: 13593805-13595804 Glycine max
Glyma.15G160400 5.0kb upstream 5.0kb upstream 11731 true Chr15: 13595805-13607535 Glycine max
Glyma.15G160400 5.0kb upstream 5.0kb upstream 5000 false Chr15: 13602536-13607535 Glycine max
Glyma.15G160400 5.0kb downstream 5.0kb downstream 11731 true Chr15: 13590805-13602535 Glycine max
Glyma.15G160400 5.0kb downstream 5.0kb downstream 5000 false Chr15: 13590805-13595804 Glycine max
Glyma.15G160400 10.0kb upstream 10.0kb upstream 16731 true Chr15: 13595805-13612535 Glycine max
Glyma.15G160400 10.0kb upstream 10.0kb upstream 10000 false Chr15: 13602536-13612535 Glycine max
Glyma.15G160400 10.0kb downstream 10.0kb downstream 16731 true Chr15: 13585805-13602535 Glycine max
Glyma.15G160400 10.0kb downstream 10.0kb downstream 10000 false Chr15: 13585805-13595804 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310241 5265 Fabidae View MSA
124074259 5270 Rosid View MSA
123753624 5271 Pentapetalae View MSA
122797775 5272 Eudicot View MSA
122051097 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351705 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.1281 0.0 35.8882   High
cufflinks 6.1921 0.0 19.7091    
cufflinks 9.30267 0.0 27.9281    
cufflinks 4.09141 0.0 14.3306    
cufflinks 3.70609 0.0 13.4432    
cufflinks 5.99164 0.0 19.1753    
cufflinks 1.2144 0.0 6.20702   Low
cufflinks 8.05892 0.0 25.9349    
cufflinks 6.09951 0.0 19.4445    
cufflinks 1.128        
cufflinks 0.414       Low
cufflinks 1.341        
cufflinks 1.335        
cufflinks 0.501       Low
cufflinks 0.765        
cufflinks 0.795        
cufflinks 2.272       High
cufflinks 1.082        
cufflinks 1.447        
cufflinks 0.914        
cufflinks 0.49       Low
cufflinks 1.254        
cufflinks 1.493        
cufflinks 0.486       Low
cufflinks 0.884        
cufflinks 1.03        

0 Strain