Gene : Glyma.15G143700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR30620:SF50 - BETA-D-XYLOSIDASE 1 Genomic Order:  1437
Name:  ? Glyma.15G143700 Secondary Identifier:  ? PAC:30496199
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G143700 0.5kb upstream 0.5kb upstream 7305 true Chr15: 11812131-11819435 Glycine max
Glyma.15G143700 0.5kb upstream 0.5kb upstream 500 false Chr15: 11812131-11812630 Glycine max
Glyma.15G143700 0.5kb downstream 0.5kb downstream 7305 true Chr15: 11812631-11819935 Glycine max
Glyma.15G143700 0.5kb downstream 0.5kb downstream 500 false Chr15: 11819436-11819935 Glycine max
Glyma.15G143700 1.0kb upstream 1.0kb upstream 7805 true Chr15: 11811631-11819435 Glycine max
Glyma.15G143700 1.0kb upstream 1.0kb upstream 1000 false Chr15: 11811631-11812630 Glycine max
Glyma.15G143700 1.0kb downstream 1.0kb downstream 7805 true Chr15: 11812631-11820435 Glycine max
Glyma.15G143700 1.0kb downstream 1.0kb downstream 1000 false Chr15: 11819436-11820435 Glycine max
Glyma.15G143700 2.0kb upstream 2.0kb upstream 8805 true Chr15: 11810631-11819435 Glycine max
Glyma.15G143700 2.0kb upstream 2.0kb upstream 2000 false Chr15: 11810631-11812630 Glycine max
Glyma.15G143700 2.0kb downstream 2.0kb downstream 8805 true Chr15: 11812631-11821435 Glycine max
Glyma.15G143700 2.0kb downstream 2.0kb downstream 2000 false Chr15: 11819436-11821435 Glycine max
Glyma.15G143700 5.0kb upstream 5.0kb upstream 11805 true Chr15: 11807631-11819435 Glycine max
Glyma.15G143700 5.0kb upstream 5.0kb upstream 5000 false Chr15: 11807631-11812630 Glycine max
Glyma.15G143700 5.0kb downstream 5.0kb downstream 11805 true Chr15: 11812631-11824435 Glycine max
Glyma.15G143700 5.0kb downstream 5.0kb downstream 5000 false Chr15: 11819436-11824435 Glycine max
Glyma.15G143700 10.0kb upstream 10.0kb upstream 16805 true Chr15: 11802631-11819435 Glycine max
Glyma.15G143700 10.0kb upstream 10.0kb upstream 10000 false Chr15: 11802631-11812630 Glycine max
Glyma.15G143700 10.0kb downstream 10.0kb downstream 16805 true Chr15: 11812631-11829435 Glycine max
Glyma.15G143700 10.0kb downstream 10.0kb downstream 10000 false Chr15: 11819436-11829435 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303705 5265 Fabidae View MSA
124066127 5270 Rosid View MSA
123744774 5271 Pentapetalae View MSA
122789153 5272 Eudicot View MSA
122047485 5273 Angiosperm View MSA
121349595 5274 Embryophyte View MSA
123381370 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.1022 0.0 78.7109    
cufflinks 2.76862 0.0 10.1978   Low
cufflinks 376.897 0.0 6364.87 High High
cufflinks 12.4179 0.0 36.8051    
cufflinks 13.3144 0.0 39.9285    
cufflinks 11.5519 0.0 44.4532    
cufflinks 43.2891 0.0 210.009 High  
cufflinks 6.55558 0.0 20.1318    
cufflinks 16.0887 0.0 65.1271    
cufflinks 4.842        
cufflinks 1.198        
cufflinks 59.245     High High
cufflinks 5.724        
cufflinks 3.835        
cufflinks 0.444       Low
cufflinks 1.828        
cufflinks 0.62        
cufflinks 7.141       High
cufflinks 1.191        
cufflinks 3.29        
cufflinks 1.194        
cufflinks 0.692        
cufflinks 0.242       Low
cufflinks 1.662        
cufflinks 3.073        
cufflinks 0.473       Low

0 Strain