Gene : Glyma.15G148900 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11991 - TRANSLATIONALLY CONTROLLED TUMOR PROTEIN-RELATED Genomic Order:  1489
Name:  ? Glyma.15G148900 Secondary Identifier:  ? PAC:30496318
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G148900 0.5kb upstream 0.5kb upstream 2406 true Chr15: 12267989-12270394 Glycine max
Glyma.15G148900 0.5kb upstream 0.5kb upstream 500 false Chr15: 12269895-12270394 Glycine max
Glyma.15G148900 0.5kb downstream 0.5kb downstream 2406 true Chr15: 12267489-12269894 Glycine max
Glyma.15G148900 0.5kb downstream 0.5kb downstream 500 false Chr15: 12267489-12267988 Glycine max
Glyma.15G148900 1.0kb upstream 1.0kb upstream 2906 true Chr15: 12267989-12270894 Glycine max
Glyma.15G148900 1.0kb upstream 1.0kb upstream 1000 false Chr15: 12269895-12270894 Glycine max
Glyma.15G148900 1.0kb downstream 1.0kb downstream 2906 true Chr15: 12266989-12269894 Glycine max
Glyma.15G148900 1.0kb downstream 1.0kb downstream 1000 false Chr15: 12266989-12267988 Glycine max
Glyma.15G148900 2.0kb upstream 2.0kb upstream 3906 true Chr15: 12267989-12271894 Glycine max
Glyma.15G148900 2.0kb upstream 2.0kb upstream 2000 false Chr15: 12269895-12271894 Glycine max
Glyma.15G148900 2.0kb downstream 2.0kb downstream 3906 true Chr15: 12265989-12269894 Glycine max
Glyma.15G148900 2.0kb downstream 2.0kb downstream 2000 false Chr15: 12265989-12267988 Glycine max
Glyma.15G148900 5.0kb upstream 5.0kb upstream 6906 true Chr15: 12267989-12274894 Glycine max
Glyma.15G148900 5.0kb upstream 5.0kb upstream 5000 false Chr15: 12269895-12274894 Glycine max
Glyma.15G148900 5.0kb downstream 5.0kb downstream 6906 true Chr15: 12262989-12269894 Glycine max
Glyma.15G148900 5.0kb downstream 5.0kb downstream 5000 false Chr15: 12262989-12267988 Glycine max
Glyma.15G148900 10.0kb upstream 10.0kb upstream 11906 true Chr15: 12267989-12279894 Glycine max
Glyma.15G148900 10.0kb upstream 10.0kb upstream 10000 false Chr15: 12269895-12279894 Glycine max
Glyma.15G148900 10.0kb downstream 10.0kb downstream 11906 true Chr15: 12257989-12269894 Glycine max
Glyma.15G148900 10.0kb downstream 10.0kb downstream 10000 false Chr15: 12257989-12267988 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297933 5265 Fabidae View MSA
124072412 5270 Rosid View MSA
123743771 5271 Pentapetalae View MSA
122796056 5272 Eudicot View MSA
122046002 5273 Angiosperm View MSA
121343936 5274 Embryophyte View MSA
123424738 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 269.099 0.0 1246.62 High  
cufflinks 316.729 0.0 1710.45 High  
cufflinks 226.985 0.0 1003.03 High Low
cufflinks 311.974 0.0 1609.61 High  
cufflinks 489.392 0.0 3217.13 High  
cufflinks 378.145 0.0 2124.78 High  
cufflinks 811.462 0.0 7554.55 High High
cufflinks 413.54 0.0 2434.76 High  
cufflinks 477.632 0.0 3139.24 High  
cufflinks 61.385     High  
cufflinks 67.682     High  
cufflinks 49.058     High  
cufflinks 89.806     High High
cufflinks 123.707     High High
cufflinks 74.301     High  
cufflinks 37.753     High Low
cufflinks 58.31     High  
cufflinks 75.668     High  
cufflinks 52.639     High  
cufflinks 43.53     High  
cufflinks 67.424     High  
cufflinks 43.563     High  
cufflinks 37.46     High Low
cufflinks 62.281     High  
cufflinks 42.345     High Low
cufflinks 55.959     High  

0 Strain