Gene : Glyma.15G149800 G. max Wm82.a2.v1

Defline:  (1 of 8) PTHR10791:SF29 - BIDIRECTIONAL SUGAR TRANSPORTER SWEET16-RELATED Genomic Order:  1498
Name:  ? Glyma.15G149800 Secondary Identifier:  ? PAC:30497925

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G149800 0.5kb upstream 0.5kb upstream 4444 true Chr15: 12371767-12376210 Glycine max
Glyma.15G149800 0.5kb upstream 0.5kb upstream 500 false Chr15: 12375711-12376210 Glycine max
Glyma.15G149800 0.5kb downstream 0.5kb downstream 4444 true Chr15: 12371267-12375710 Glycine max
Glyma.15G149800 0.5kb downstream 0.5kb downstream 500 false Chr15: 12371267-12371766 Glycine max
Glyma.15G149800 1.0kb upstream 1.0kb upstream 4944 true Chr15: 12371767-12376710 Glycine max
Glyma.15G149800 1.0kb upstream 1.0kb upstream 1000 false Chr15: 12375711-12376710 Glycine max
Glyma.15G149800 1.0kb downstream 1.0kb downstream 4944 true Chr15: 12370767-12375710 Glycine max
Glyma.15G149800 1.0kb downstream 1.0kb downstream 1000 false Chr15: 12370767-12371766 Glycine max
Glyma.15G149800 2.0kb upstream 2.0kb upstream 5944 true Chr15: 12371767-12377710 Glycine max
Glyma.15G149800 2.0kb upstream 2.0kb upstream 2000 false Chr15: 12375711-12377710 Glycine max
Glyma.15G149800 2.0kb downstream 2.0kb downstream 5944 true Chr15: 12369767-12375710 Glycine max
Glyma.15G149800 2.0kb downstream 2.0kb downstream 2000 false Chr15: 12369767-12371766 Glycine max
Glyma.15G149800 5.0kb upstream 5.0kb upstream 8944 true Chr15: 12371767-12380710 Glycine max
Glyma.15G149800 5.0kb upstream 5.0kb upstream 5000 false Chr15: 12375711-12380710 Glycine max
Glyma.15G149800 5.0kb downstream 5.0kb downstream 8944 true Chr15: 12366767-12375710 Glycine max
Glyma.15G149800 5.0kb downstream 5.0kb downstream 5000 false Chr15: 12366767-12371766 Glycine max
Glyma.15G149800 10.0kb upstream 10.0kb upstream 13944 true Chr15: 12371767-12385710 Glycine max
Glyma.15G149800 10.0kb upstream 10.0kb upstream 10000 false Chr15: 12375711-12385710 Glycine max
Glyma.15G149800 10.0kb downstream 10.0kb downstream 13944 true Chr15: 12361767-12375710 Glycine max
Glyma.15G149800 10.0kb downstream 10.0kb downstream 10000 false Chr15: 12361767-12371766 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308627 5265 Fabidae View MSA
124071038 5270 Rosid View MSA
123749564 5271 Pentapetalae View MSA
122795200 5272 Eudicot View MSA
122043077 5273 Angiosperm View MSA
121350795 5274 Embryophyte View MSA
123428840 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.10282 0.0 4.04885    
cufflinks 3.36939 0.0 11.2689    
cufflinks 4.06026 0.0 13.1899    
cufflinks 39.3869 0.0 105.18 High High
cufflinks 0.266233 0.0 1.04254   Low
cufflinks 0.21981 0.0 0.866071 Low Low
cufflinks 0.97558 0.0 3.60734    
cufflinks 5.20811 0.0 16.4085    
cufflinks 0.35256 0.0 1.36368    
cufflinks 1.44        
cufflinks 0.005     Low Low
cufflinks 1.457       High
cufflinks 0.004     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.259        
cufflinks 0.092        
cufflinks 1.495       High
cufflinks 2.392       High
cufflinks 0.092     Low  
cufflinks 0.022     Low  
cufflinks 0.261        
cufflinks 1.324        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.218        
cufflinks 0.018     Low Low

0 Strain