Gene : Glyma.15G152000 G. max Wm82.a2.v1
Defline:  (1 of 354) PF00847 - AP2 domain (AP2) Genomic Order:  1520
Name:  ? Glyma.15G152000 Secondary Identifier:  ? PAC:30498837
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G152000 0.5kb upstream 0.5kb upstream 2815 true Chr15: 12592155-12594969 Glycine max
Glyma.15G152000 0.5kb upstream 0.5kb upstream 500 false Chr15: 12592155-12592654 Glycine max
Glyma.15G152000 0.5kb downstream 0.5kb downstream 2815 true Chr15: 12592655-12595469 Glycine max
Glyma.15G152000 0.5kb downstream 0.5kb downstream 500 false Chr15: 12594970-12595469 Glycine max
Glyma.15G152000 1.0kb upstream 1.0kb upstream 3315 true Chr15: 12591655-12594969 Glycine max
Glyma.15G152000 1.0kb upstream 1.0kb upstream 1000 false Chr15: 12591655-12592654 Glycine max
Glyma.15G152000 1.0kb downstream 1.0kb downstream 3315 true Chr15: 12592655-12595969 Glycine max
Glyma.15G152000 1.0kb downstream 1.0kb downstream 1000 false Chr15: 12594970-12595969 Glycine max
Glyma.15G152000 2.0kb upstream 2.0kb upstream 4315 true Chr15: 12590655-12594969 Glycine max
Glyma.15G152000 2.0kb upstream 2.0kb upstream 2000 false Chr15: 12590655-12592654 Glycine max
Glyma.15G152000 2.0kb downstream 2.0kb downstream 4315 true Chr15: 12592655-12596969 Glycine max
Glyma.15G152000 2.0kb downstream 2.0kb downstream 2000 false Chr15: 12594970-12596969 Glycine max
Glyma.15G152000 5.0kb upstream 5.0kb upstream 7315 true Chr15: 12587655-12594969 Glycine max
Glyma.15G152000 5.0kb upstream 5.0kb upstream 5000 false Chr15: 12587655-12592654 Glycine max
Glyma.15G152000 5.0kb downstream 5.0kb downstream 7315 true Chr15: 12592655-12599969 Glycine max
Glyma.15G152000 5.0kb downstream 5.0kb downstream 5000 false Chr15: 12594970-12599969 Glycine max
Glyma.15G152000 10.0kb upstream 10.0kb upstream 12315 true Chr15: 12582655-12594969 Glycine max
Glyma.15G152000 10.0kb upstream 10.0kb upstream 10000 false Chr15: 12582655-12592654 Glycine max
Glyma.15G152000 10.0kb downstream 10.0kb downstream 12315 true Chr15: 12592655-12604969 Glycine max
Glyma.15G152000 10.0kb downstream 10.0kb downstream 10000 false Chr15: 12594970-12604969 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304702 5265 Fabidae View MSA
124065952 5270 Rosid View MSA
123736884 5271 Pentapetalae View MSA
122769881 5272 Eudicot View MSA
122050930 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 95.5181 0.0 274.246 High  
cufflinks 54.7295 0.0 148.495 High  
cufflinks 149.399 0.0 451.767 High  
cufflinks 109.464 0.0 319.088 High  
cufflinks 45.8781 0.0 123.863 High  
cufflinks 4.58005 0.0 14.3914   Low
cufflinks 134.32 0.0 406.622 High  
cufflinks 233.346 0.0 780.007 High High
cufflinks 42.4787 0.0 114.077 High  
cufflinks 5.153        
cufflinks 20.841     High High
cufflinks 16.596     High High
cufflinks 1.768       Low
cufflinks 0.745       Low
cufflinks 7.701     High  
cufflinks 3.034        
cufflinks 5.942        
cufflinks 11.29     High  
cufflinks 11.338     High  
cufflinks 8.991     High  
cufflinks 15.207     High  
cufflinks 5.96        
cufflinks 2.553       Low
cufflinks 16.433     High High
cufflinks 4.496        
cufflinks 7.746     High  

0 Strain