Gene : Glyma.15G136700 G. max Wm82.a2.v1
Defline:  (1 of 7) PF13229 - Right handed beta helix region (Beta_helix) Genomic Order:  1367
Name:  ? Glyma.15G136700 Secondary Identifier:  ? PAC:30499347
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-1081 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G136700 0.5kb upstream 0.5kb upstream 5766 true Chr15: 11053772-11059537 Glycine max
Glyma.15G136700 0.5kb upstream 0.5kb upstream 500 false Chr15: 11059038-11059537 Glycine max
Glyma.15G136700 0.5kb downstream 0.5kb downstream 5766 true Chr15: 11053272-11059037 Glycine max
Glyma.15G136700 0.5kb downstream 0.5kb downstream 500 false Chr15: 11053272-11053771 Glycine max
Glyma.15G136700 1.0kb upstream 1.0kb upstream 6266 true Chr15: 11053772-11060037 Glycine max
Glyma.15G136700 1.0kb upstream 1.0kb upstream 1000 false Chr15: 11059038-11060037 Glycine max
Glyma.15G136700 1.0kb downstream 1.0kb downstream 6266 true Chr15: 11052772-11059037 Glycine max
Glyma.15G136700 1.0kb downstream 1.0kb downstream 1000 false Chr15: 11052772-11053771 Glycine max
Glyma.15G136700 2.0kb upstream 2.0kb upstream 7266 true Chr15: 11053772-11061037 Glycine max
Glyma.15G136700 2.0kb upstream 2.0kb upstream 2000 false Chr15: 11059038-11061037 Glycine max
Glyma.15G136700 2.0kb downstream 2.0kb downstream 7266 true Chr15: 11051772-11059037 Glycine max
Glyma.15G136700 2.0kb downstream 2.0kb downstream 2000 false Chr15: 11051772-11053771 Glycine max
Glyma.15G136700 5.0kb upstream 5.0kb upstream 10266 true Chr15: 11053772-11064037 Glycine max
Glyma.15G136700 5.0kb upstream 5.0kb upstream 5000 false Chr15: 11059038-11064037 Glycine max
Glyma.15G136700 5.0kb downstream 5.0kb downstream 10266 true Chr15: 11048772-11059037 Glycine max
Glyma.15G136700 5.0kb downstream 5.0kb downstream 5000 false Chr15: 11048772-11053771 Glycine max
Glyma.15G136700 10.0kb upstream 10.0kb upstream 15266 true Chr15: 11053772-11069037 Glycine max
Glyma.15G136700 10.0kb upstream 10.0kb upstream 10000 false Chr15: 11059038-11069037 Glycine max
Glyma.15G136700 10.0kb downstream 10.0kb downstream 15266 true Chr15: 11043772-11059037 Glycine max
Glyma.15G136700 10.0kb downstream 10.0kb downstream 10000 false Chr15: 11043772-11053771 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312563 5265 Fabidae View MSA
124065487 5270 Rosid View MSA
123736627 5271 Pentapetalae View MSA
122795582 5272 Eudicot View MSA
122048646 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.204059 0.0 0.988995 Low  
cufflinks 0.155568 0.0 1.43283 Low Low
cufflinks 0.108323 0.0 0.425349 Low Low
cufflinks 2.00762 0.0 9.20838   High
cufflinks 1.3761 0.0 7.02759    
cufflinks 1.657 0.0 8.08431    
cufflinks 1.41587 0.0 7.34813    
cufflinks 0.247568 0.0 1.21925    
cufflinks 1.39393 0.0 7.03126    
cufflinks 0.168        
cufflinks 0.032     Low Low
cufflinks 0.139        
cufflinks 1.983       High
cufflinks 2.288       High
cufflinks 0.118        
cufflinks 0.452        
cufflinks 0.021     Low Low
cufflinks 0.099     Low  
cufflinks 0.646        
cufflinks 0.142        
cufflinks 0.134        
cufflinks 0.31        
cufflinks 0.629        
cufflinks 0.02     Low Low
cufflinks 0.409        
cufflinks 0.129        

0 Strain