Gene : Glyma.15G136800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10724 - S1 RNA-BINDING DOMAIN-CONTAINING PROTEIN 1 Genomic Order:  1368
Name:  ? Glyma.15G136800 Secondary Identifier:  ? PAC:30496452
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G136800 0.5kb upstream 0.5kb upstream 5039 true Chr15: 11067044-11072082 Glycine max
Glyma.15G136800 0.5kb upstream 0.5kb upstream 500 false Chr15: 11067044-11067543 Glycine max
Glyma.15G136800 0.5kb downstream 0.5kb downstream 5039 true Chr15: 11067544-11072582 Glycine max
Glyma.15G136800 0.5kb downstream 0.5kb downstream 500 false Chr15: 11072083-11072582 Glycine max
Glyma.15G136800 1.0kb upstream 1.0kb upstream 5539 true Chr15: 11066544-11072082 Glycine max
Glyma.15G136800 1.0kb upstream 1.0kb upstream 1000 false Chr15: 11066544-11067543 Glycine max
Glyma.15G136800 1.0kb downstream 1.0kb downstream 5539 true Chr15: 11067544-11073082 Glycine max
Glyma.15G136800 1.0kb downstream 1.0kb downstream 1000 false Chr15: 11072083-11073082 Glycine max
Glyma.15G136800 2.0kb upstream 2.0kb upstream 6539 true Chr15: 11065544-11072082 Glycine max
Glyma.15G136800 2.0kb upstream 2.0kb upstream 2000 false Chr15: 11065544-11067543 Glycine max
Glyma.15G136800 2.0kb downstream 2.0kb downstream 6539 true Chr15: 11067544-11074082 Glycine max
Glyma.15G136800 2.0kb downstream 2.0kb downstream 2000 false Chr15: 11072083-11074082 Glycine max
Glyma.15G136800 5.0kb upstream 5.0kb upstream 9539 true Chr15: 11062544-11072082 Glycine max
Glyma.15G136800 5.0kb upstream 5.0kb upstream 5000 false Chr15: 11062544-11067543 Glycine max
Glyma.15G136800 5.0kb downstream 5.0kb downstream 9539 true Chr15: 11067544-11077082 Glycine max
Glyma.15G136800 5.0kb downstream 5.0kb downstream 5000 false Chr15: 11072083-11077082 Glycine max
Glyma.15G136800 10.0kb upstream 10.0kb upstream 14539 true Chr15: 11057544-11072082 Glycine max
Glyma.15G136800 10.0kb upstream 10.0kb upstream 10000 false Chr15: 11057544-11067543 Glycine max
Glyma.15G136800 10.0kb downstream 10.0kb downstream 14539 true Chr15: 11067544-11082082 Glycine max
Glyma.15G136800 10.0kb downstream 10.0kb downstream 10000 false Chr15: 11072083-11082082 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311491 5265 Fabidae View MSA
124061021 5270 Rosid View MSA
123748044 5271 Pentapetalae View MSA
122788997 5272 Eudicot View MSA
122042339 5273 Angiosperm View MSA
121347373 5274 Embryophyte View MSA
123425881 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.6809 0.0 60.6063   High
cufflinks 7.4609 0.0 24.3376    
cufflinks 3.69293 0.0 11.1807   Low
cufflinks 6.79808 0.0 22.4892    
cufflinks 4.43743 0.0 16.4282    
cufflinks 3.16597 0.0 14.5514   Low
cufflinks 7.58646 0.0 24.7504    
cufflinks 6.25613 0.0 21.0406    
cufflinks 5.25588 0.0 18.5357    
cufflinks 1.831        
cufflinks 0.38       Low
cufflinks 1.384        
cufflinks 1.079        
cufflinks 1.178        
cufflinks 0.473       Low
cufflinks 4.484       High
cufflinks 0.476       Low
cufflinks 1.188        
cufflinks 2.312        
cufflinks 3.341       High
cufflinks 0.493       Low
cufflinks 3.427       High
cufflinks 4.504       High
cufflinks 0.426       Low
cufflinks 4.18       High
cufflinks 0.42       Low

0 Strain