Gene : Glyma.15G142900 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR15371:SF1 - OUTER ENVELOPE PORE PROTEIN 16-2, CHLOROPLASTIC Genomic Order:  1429
Name:  ? Glyma.15G142900 Secondary Identifier:  ? PAC:30495672
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G142900 0.5kb upstream 0.5kb upstream 3361 true Chr15: 11710298-11713658 Glycine max
Glyma.15G142900 0.5kb upstream 0.5kb upstream 500 false Chr15: 11713159-11713658 Glycine max
Glyma.15G142900 0.5kb downstream 0.5kb downstream 3361 true Chr15: 11709798-11713158 Glycine max
Glyma.15G142900 0.5kb downstream 0.5kb downstream 500 false Chr15: 11709798-11710297 Glycine max
Glyma.15G142900 1.0kb upstream 1.0kb upstream 3861 true Chr15: 11710298-11714158 Glycine max
Glyma.15G142900 1.0kb upstream 1.0kb upstream 1000 false Chr15: 11713159-11714158 Glycine max
Glyma.15G142900 1.0kb downstream 1.0kb downstream 3861 true Chr15: 11709298-11713158 Glycine max
Glyma.15G142900 1.0kb downstream 1.0kb downstream 1000 false Chr15: 11709298-11710297 Glycine max
Glyma.15G142900 2.0kb upstream 2.0kb upstream 4861 true Chr15: 11710298-11715158 Glycine max
Glyma.15G142900 2.0kb upstream 2.0kb upstream 2000 false Chr15: 11713159-11715158 Glycine max
Glyma.15G142900 2.0kb downstream 2.0kb downstream 4861 true Chr15: 11708298-11713158 Glycine max
Glyma.15G142900 2.0kb downstream 2.0kb downstream 2000 false Chr15: 11708298-11710297 Glycine max
Glyma.15G142900 5.0kb upstream 5.0kb upstream 7861 true Chr15: 11710298-11718158 Glycine max
Glyma.15G142900 5.0kb upstream 5.0kb upstream 5000 false Chr15: 11713159-11718158 Glycine max
Glyma.15G142900 5.0kb downstream 5.0kb downstream 7861 true Chr15: 11705298-11713158 Glycine max
Glyma.15G142900 5.0kb downstream 5.0kb downstream 5000 false Chr15: 11705298-11710297 Glycine max
Glyma.15G142900 10.0kb upstream 10.0kb upstream 12861 true Chr15: 11710298-11723158 Glycine max
Glyma.15G142900 10.0kb upstream 10.0kb upstream 10000 false Chr15: 11713159-11723158 Glycine max
Glyma.15G142900 10.0kb downstream 10.0kb downstream 12861 true Chr15: 11700298-11713158 Glycine max
Glyma.15G142900 10.0kb downstream 10.0kb downstream 10000 false Chr15: 11700298-11710297 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311565 5265 Fabidae View MSA
124062569 5270 Rosid View MSA
123744668 5271 Pentapetalae View MSA
122786883 5272 Eudicot View MSA
122042024 5273 Angiosperm View MSA
121351081 5274 Embryophyte View MSA
123382000 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.111159 0.0 0.452963 Low  
cufflinks 0.192921 0.0 0.768761 Low  
cufflinks 0.400663 0.0 1.98314    
cufflinks 0.954437 0.0 6.67817    
cufflinks 1.11445 0.0 5.29931    
cufflinks 0.467602 0.0 2.33179    
cufflinks 392.815 0.0 2795.83 High High
cufflinks 0.434869 0.0 3.11992    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.005     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.154       High
cufflinks 0.006     Low  
cufflinks 0.016     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.014     Low  
cufflinks 0.001     Low Low
cufflinks 0.795       High
cufflinks 0.012     Low  
cufflinks 0.012     Low  
cufflinks 0.007     Low  
cufflinks 0.012     Low  
cufflinks 0.007     Low  
cufflinks 0.005     Low  
cufflinks 0.02     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain