Gene : Glyma.15G129300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12634:SF17 - SIT4 PHOSPHATASE-ASSOCIATED FAMILY PROTEIN Genomic Order:  1293
Name:  ? Glyma.15G129300 Secondary Identifier:  ? PAC:30496983
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G129300 0.5kb upstream 0.5kb upstream 27052 true Chr15: 10321086-10348137 Glycine max
Glyma.15G129300 0.5kb upstream 0.5kb upstream 500 false Chr15: 10347638-10348137 Glycine max
Glyma.15G129300 0.5kb downstream 0.5kb downstream 27052 true Chr15: 10320586-10347637 Glycine max
Glyma.15G129300 0.5kb downstream 0.5kb downstream 500 false Chr15: 10320586-10321085 Glycine max
Glyma.15G129300 1.0kb upstream 1.0kb upstream 27552 true Chr15: 10321086-10348637 Glycine max
Glyma.15G129300 1.0kb upstream 1.0kb upstream 1000 false Chr15: 10347638-10348637 Glycine max
Glyma.15G129300 1.0kb downstream 1.0kb downstream 27552 true Chr15: 10320086-10347637 Glycine max
Glyma.15G129300 1.0kb downstream 1.0kb downstream 1000 false Chr15: 10320086-10321085 Glycine max
Glyma.15G129300 2.0kb upstream 2.0kb upstream 28552 true Chr15: 10321086-10349637 Glycine max
Glyma.15G129300 2.0kb upstream 2.0kb upstream 2000 false Chr15: 10347638-10349637 Glycine max
Glyma.15G129300 2.0kb downstream 2.0kb downstream 28552 true Chr15: 10319086-10347637 Glycine max
Glyma.15G129300 2.0kb downstream 2.0kb downstream 2000 false Chr15: 10319086-10321085 Glycine max
Glyma.15G129300 5.0kb upstream 5.0kb upstream 31552 true Chr15: 10321086-10352637 Glycine max
Glyma.15G129300 5.0kb upstream 5.0kb upstream 5000 false Chr15: 10347638-10352637 Glycine max
Glyma.15G129300 5.0kb downstream 5.0kb downstream 31552 true Chr15: 10316086-10347637 Glycine max
Glyma.15G129300 5.0kb downstream 5.0kb downstream 5000 false Chr15: 10316086-10321085 Glycine max
Glyma.15G129300 10.0kb upstream 10.0kb upstream 36552 true Chr15: 10321086-10357637 Glycine max
Glyma.15G129300 10.0kb upstream 10.0kb upstream 10000 false Chr15: 10347638-10357637 Glycine max
Glyma.15G129300 10.0kb downstream 10.0kb downstream 36552 true Chr15: 10311086-10347637 Glycine max
Glyma.15G129300 10.0kb downstream 10.0kb downstream 10000 false Chr15: 10311086-10321085 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299962 5265 Fabidae View MSA
124069403 5270 Rosid View MSA
123742234 5271 Pentapetalae View MSA
122794805 5272 Eudicot View MSA
122051052 5273 Angiosperm View MSA
121347725 5274 Embryophyte View MSA
123428189 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.86463 0.0 23.65    
cufflinks 9.34031 0.0 24.9209    
cufflinks 10.8501 0.0 29.0257   High
cufflinks 7.68023 0.0 20.5105    
cufflinks 7.97838 0.0 21.3055    
cufflinks 9.85488 0.0 26.3016   High
cufflinks 6.79512 0.0 18.2104   Low
cufflinks 7.69661 0.0 20.5554    
cufflinks 7.12413 0.0 19.0603   Low
cufflinks 1.309        
cufflinks 1.271        
cufflinks 1.598       High
cufflinks 1.397        
cufflinks 1.375        
cufflinks 1.092       Low
cufflinks 1.467        
cufflinks 1.193       Low
cufflinks 1.536        
cufflinks 1.661       High
cufflinks 1.429        
cufflinks 1.17       Low
cufflinks 1.565        
cufflinks 1.659       High
cufflinks 1.28        
cufflinks 1.449        
cufflinks 1.532        

0 Strain