Gene : Glyma.15G130500 G. max Wm82.a2.v1
Defline:  (1 of 2) 6.2.1.26 - o-succinylbenzoate--CoA ligase / OSB-CoA synthetase Genomic Order:  1305
Name:  ? Glyma.15G130500 Secondary Identifier:  ? PAC:30495764
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5837 Glycine max pathologic  

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G130500 0.5kb upstream 0.5kb upstream 7669 true Chr15: 10468943-10476611 Glycine max
Glyma.15G130500 0.5kb upstream 0.5kb upstream 500 false Chr15: 10468943-10469442 Glycine max
Glyma.15G130500 0.5kb downstream 0.5kb downstream 7669 true Chr15: 10469443-10477111 Glycine max
Glyma.15G130500 0.5kb downstream 0.5kb downstream 500 false Chr15: 10476612-10477111 Glycine max
Glyma.15G130500 1.0kb upstream 1.0kb upstream 8169 true Chr15: 10468443-10476611 Glycine max
Glyma.15G130500 1.0kb upstream 1.0kb upstream 1000 false Chr15: 10468443-10469442 Glycine max
Glyma.15G130500 1.0kb downstream 1.0kb downstream 8169 true Chr15: 10469443-10477611 Glycine max
Glyma.15G130500 1.0kb downstream 1.0kb downstream 1000 false Chr15: 10476612-10477611 Glycine max
Glyma.15G130500 2.0kb upstream 2.0kb upstream 9169 true Chr15: 10467443-10476611 Glycine max
Glyma.15G130500 2.0kb upstream 2.0kb upstream 2000 false Chr15: 10467443-10469442 Glycine max
Glyma.15G130500 2.0kb downstream 2.0kb downstream 9169 true Chr15: 10469443-10478611 Glycine max
Glyma.15G130500 2.0kb downstream 2.0kb downstream 2000 false Chr15: 10476612-10478611 Glycine max
Glyma.15G130500 5.0kb upstream 5.0kb upstream 12169 true Chr15: 10464443-10476611 Glycine max
Glyma.15G130500 5.0kb upstream 5.0kb upstream 5000 false Chr15: 10464443-10469442 Glycine max
Glyma.15G130500 5.0kb downstream 5.0kb downstream 12169 true Chr15: 10469443-10481611 Glycine max
Glyma.15G130500 5.0kb downstream 5.0kb downstream 5000 false Chr15: 10476612-10481611 Glycine max
Glyma.15G130500 10.0kb upstream 10.0kb upstream 17169 true Chr15: 10459443-10476611 Glycine max
Glyma.15G130500 10.0kb upstream 10.0kb upstream 10000 false Chr15: 10459443-10469442 Glycine max
Glyma.15G130500 10.0kb downstream 10.0kb downstream 17169 true Chr15: 10469443-10486611 Glycine max
Glyma.15G130500 10.0kb downstream 10.0kb downstream 10000 false Chr15: 10476612-10486611 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301753 5265 Fabidae View MSA
124061989 5270 Rosid View MSA
123752148 5271 Pentapetalae View MSA
122787718 5272 Eudicot View MSA
122042580 5273 Angiosperm View MSA
121346156 5274 Embryophyte View MSA
123427881 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.06943 0.0 22.6864    
cufflinks 4.632 0.0 21.3628    
cufflinks 3.92323 0.0 16.9038    
cufflinks 2.99264 0.0 14.2633    
cufflinks 1.4694 0.0 7.48243    
cufflinks 4.0909 0.0 19.8571    
cufflinks 2.39899 0.0 13.0808    
cufflinks 2.27961 0.0 10.2426    
cufflinks 0.217035 0.0 1.08473 Low Low
cufflinks 0.564        
cufflinks 0.073        
cufflinks 0.436        
cufflinks 0.084     Low  
cufflinks 0.087        
cufflinks 0.017     Low Low
cufflinks 1.512       High
cufflinks 0.02     Low Low
cufflinks 0.315        
cufflinks 0.611        
cufflinks 1.719       High
cufflinks 0.084        
cufflinks 1.68       High
cufflinks 1.385       High
cufflinks 0.042     Low Low
cufflinks 1.643       High
cufflinks 0.087        

0 Strain