Gene : Glyma.15G131200 G. max Wm82.a2.v1
Defline:  (1 of 6) PF03807//PF14833 - NADP oxidoreductase coenzyme F420-dependent (F420_oxidored) // NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase (NAD_binding_11) Genomic Order:  1312
Name:  ? Glyma.15G131200 Secondary Identifier:  ? PAC:30497413
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax VALDEG-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G131200 0.5kb upstream 0.5kb upstream 7150 true Chr15: 10541773-10548922 Glycine max
Glyma.15G131200 0.5kb upstream 0.5kb upstream 500 false Chr15: 10548423-10548922 Glycine max
Glyma.15G131200 0.5kb downstream 0.5kb downstream 7150 true Chr15: 10541273-10548422 Glycine max
Glyma.15G131200 0.5kb downstream 0.5kb downstream 500 false Chr15: 10541273-10541772 Glycine max
Glyma.15G131200 1.0kb upstream 1.0kb upstream 7650 true Chr15: 10541773-10549422 Glycine max
Glyma.15G131200 1.0kb upstream 1.0kb upstream 1000 false Chr15: 10548423-10549422 Glycine max
Glyma.15G131200 1.0kb downstream 1.0kb downstream 7650 true Chr15: 10540773-10548422 Glycine max
Glyma.15G131200 1.0kb downstream 1.0kb downstream 1000 false Chr15: 10540773-10541772 Glycine max
Glyma.15G131200 2.0kb upstream 2.0kb upstream 8650 true Chr15: 10541773-10550422 Glycine max
Glyma.15G131200 2.0kb upstream 2.0kb upstream 2000 false Chr15: 10548423-10550422 Glycine max
Glyma.15G131200 2.0kb downstream 2.0kb downstream 8650 true Chr15: 10539773-10548422 Glycine max
Glyma.15G131200 2.0kb downstream 2.0kb downstream 2000 false Chr15: 10539773-10541772 Glycine max
Glyma.15G131200 5.0kb upstream 5.0kb upstream 11650 true Chr15: 10541773-10553422 Glycine max
Glyma.15G131200 5.0kb upstream 5.0kb upstream 5000 false Chr15: 10548423-10553422 Glycine max
Glyma.15G131200 5.0kb downstream 5.0kb downstream 11650 true Chr15: 10536773-10548422 Glycine max
Glyma.15G131200 5.0kb downstream 5.0kb downstream 5000 false Chr15: 10536773-10541772 Glycine max
Glyma.15G131200 10.0kb upstream 10.0kb upstream 16650 true Chr15: 10541773-10558422 Glycine max
Glyma.15G131200 10.0kb upstream 10.0kb upstream 10000 false Chr15: 10548423-10558422 Glycine max
Glyma.15G131200 10.0kb downstream 10.0kb downstream 16650 true Chr15: 10531773-10548422 Glycine max
Glyma.15G131200 10.0kb downstream 10.0kb downstream 10000 false Chr15: 10531773-10541772 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300764 5265 Fabidae View MSA
124062564 5270 Rosid View MSA
123738883 5271 Pentapetalae View MSA
122787575 5272 Eudicot View MSA
122045971 5273 Angiosperm View MSA
121347535 5274 Embryophyte View MSA
123424560 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.22625 0.0 20.8532    
cufflinks 2.33289 0.0 13.1879    
cufflinks 10.0388 0.0 76.5392   High
cufflinks 3.02885 0.0 14.2255    
cufflinks 3.1937 0.0 36.5076    
cufflinks 2.23417 0.0 11.0107    
cufflinks 3.76818 0.0 37.0726    
cufflinks 1.6081 0.0 8.29194   Low
cufflinks 5.27269 0.0 43.4347    
cufflinks 0.152        
cufflinks 1.589       High
cufflinks 0.587        
cufflinks 0.129        
cufflinks 0.221        
cufflinks 2.082       High
cufflinks 0.099     Low Low
cufflinks 0.135        
cufflinks 0.165        
cufflinks 0.195        
cufflinks 0.161        
cufflinks 0.991       High
cufflinks 0.09     Low Low
cufflinks 0.121        
cufflinks 1.335       High
cufflinks 0.126        
cufflinks 0.593        

0 Strain