Gene : Glyma.15G131700 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR21256 - HISTIDINOL DEHYDROGENASE HDH Genomic Order:  1317
Name:  ? Glyma.15G131700 Secondary Identifier:  ? PAC:30498413
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax HISTSYN-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G131700 0.5kb upstream 0.5kb upstream 5200 true Chr15: 10581135-10586334 Glycine max
Glyma.15G131700 0.5kb upstream 0.5kb upstream 500 false Chr15: 10581135-10581634 Glycine max
Glyma.15G131700 0.5kb downstream 0.5kb downstream 5200 true Chr15: 10581635-10586834 Glycine max
Glyma.15G131700 0.5kb downstream 0.5kb downstream 500 false Chr15: 10586335-10586834 Glycine max
Glyma.15G131700 1.0kb upstream 1.0kb upstream 5700 true Chr15: 10580635-10586334 Glycine max
Glyma.15G131700 1.0kb upstream 1.0kb upstream 1000 false Chr15: 10580635-10581634 Glycine max
Glyma.15G131700 1.0kb downstream 1.0kb downstream 5700 true Chr15: 10581635-10587334 Glycine max
Glyma.15G131700 1.0kb downstream 1.0kb downstream 1000 false Chr15: 10586335-10587334 Glycine max
Glyma.15G131700 2.0kb upstream 2.0kb upstream 6700 true Chr15: 10579635-10586334 Glycine max
Glyma.15G131700 2.0kb upstream 2.0kb upstream 2000 false Chr15: 10579635-10581634 Glycine max
Glyma.15G131700 2.0kb downstream 2.0kb downstream 6700 true Chr15: 10581635-10588334 Glycine max
Glyma.15G131700 2.0kb downstream 2.0kb downstream 2000 false Chr15: 10586335-10588334 Glycine max
Glyma.15G131700 5.0kb upstream 5.0kb upstream 9700 true Chr15: 10576635-10586334 Glycine max
Glyma.15G131700 5.0kb upstream 5.0kb upstream 5000 false Chr15: 10576635-10581634 Glycine max
Glyma.15G131700 5.0kb downstream 5.0kb downstream 9700 true Chr15: 10581635-10591334 Glycine max
Glyma.15G131700 5.0kb downstream 5.0kb downstream 5000 false Chr15: 10586335-10591334 Glycine max
Glyma.15G131700 10.0kb upstream 10.0kb upstream 14700 true Chr15: 10571635-10586334 Glycine max
Glyma.15G131700 10.0kb upstream 10.0kb upstream 10000 false Chr15: 10571635-10581634 Glycine max
Glyma.15G131700 10.0kb downstream 10.0kb downstream 14700 true Chr15: 10581635-10596334 Glycine max
Glyma.15G131700 10.0kb downstream 10.0kb downstream 10000 false Chr15: 10586335-10596334 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312335 5265 Fabidae View MSA
124061664 5270 Rosid View MSA
123738837 5271 Pentapetalae View MSA
122785994 5272 Eudicot View MSA
122046994 5273 Angiosperm View MSA
121351553 5274 Embryophyte View MSA
123424167 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.8891 0.0 38.8147    
cufflinks 9.06199 0.0 28.1185    
cufflinks 3.87383 0.0 14.4381   Low
cufflinks 11.7217 0.0 40.9141    
cufflinks 9.00799 0.0 32.9205    
cufflinks 5.438 0.0 18.5314   Low
cufflinks 18.3656 0.0 64.2567   High
cufflinks 8.77013 0.0 27.1712    
cufflinks 10.4866 0.0 36.9824    
cufflinks 1.844        
cufflinks 0.127       Low
cufflinks 1.25        
cufflinks 1.637        
cufflinks 2.131        
cufflinks 0.608        
cufflinks 1.922        
cufflinks 0.477        
cufflinks 1.8        
cufflinks 1.976        
cufflinks 1.998        
cufflinks 0.2       Low
cufflinks 1.977        
cufflinks 2.275        
cufflinks 0.248       Low
cufflinks 2.096        
cufflinks 0.401        

0 Strain