Gene : Glyma.15G177700 G. max Wm82.a2.v1
Defline:  (1 of 2) PF14802 - TMEM192 family (TMEM192) Genomic Order:  1777
Name:  ? Glyma.15G177700 Secondary Identifier:  ? PAC:30495916
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G177700 0.5kb upstream 0.5kb upstream 5703 true Chr15: 16883914-16889616 Glycine max
Glyma.15G177700 0.5kb upstream 0.5kb upstream 500 false Chr15: 16889117-16889616 Glycine max
Glyma.15G177700 0.5kb downstream 0.5kb downstream 5703 true Chr15: 16883414-16889116 Glycine max
Glyma.15G177700 0.5kb downstream 0.5kb downstream 500 false Chr15: 16883414-16883913 Glycine max
Glyma.15G177700 1.0kb upstream 1.0kb upstream 6203 true Chr15: 16883914-16890116 Glycine max
Glyma.15G177700 1.0kb upstream 1.0kb upstream 1000 false Chr15: 16889117-16890116 Glycine max
Glyma.15G177700 1.0kb downstream 1.0kb downstream 6203 true Chr15: 16882914-16889116 Glycine max
Glyma.15G177700 1.0kb downstream 1.0kb downstream 1000 false Chr15: 16882914-16883913 Glycine max
Glyma.15G177700 2.0kb upstream 2.0kb upstream 7203 true Chr15: 16883914-16891116 Glycine max
Glyma.15G177700 2.0kb upstream 2.0kb upstream 2000 false Chr15: 16889117-16891116 Glycine max
Glyma.15G177700 2.0kb downstream 2.0kb downstream 7203 true Chr15: 16881914-16889116 Glycine max
Glyma.15G177700 2.0kb downstream 2.0kb downstream 2000 false Chr15: 16881914-16883913 Glycine max
Glyma.15G177700 5.0kb upstream 5.0kb upstream 10203 true Chr15: 16883914-16894116 Glycine max
Glyma.15G177700 5.0kb upstream 5.0kb upstream 5000 false Chr15: 16889117-16894116 Glycine max
Glyma.15G177700 5.0kb downstream 5.0kb downstream 10203 true Chr15: 16878914-16889116 Glycine max
Glyma.15G177700 5.0kb downstream 5.0kb downstream 5000 false Chr15: 16878914-16883913 Glycine max
Glyma.15G177700 10.0kb upstream 10.0kb upstream 15203 true Chr15: 16883914-16899116 Glycine max
Glyma.15G177700 10.0kb upstream 10.0kb upstream 10000 false Chr15: 16889117-16899116 Glycine max
Glyma.15G177700 10.0kb downstream 10.0kb downstream 15203 true Chr15: 16873914-16889116 Glycine max
Glyma.15G177700 10.0kb downstream 10.0kb downstream 10000 false Chr15: 16873914-16883913 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305823 5265 Fabidae View MSA
124068418 5270 Rosid View MSA
123736569 5271 Pentapetalae View MSA
122793760 5272 Eudicot View MSA
122046295 5273 Angiosperm View MSA
121350657 5274 Embryophyte View MSA
123423826 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.25152 0.0 25.7956    
cufflinks 10.0306 0.0 27.7634    
cufflinks 11.2311 0.0 30.7567   High
cufflinks 9.72566 0.0 26.9697    
cufflinks 6.94608 0.0 19.9618   Low
cufflinks 8.4715 0.0 23.8145    
cufflinks 12.1869 0.0 33.2746   High
cufflinks 9.53789 0.0 26.4764    
cufflinks 6.98026 0.0 20.0376   Low
cufflinks 1.737        
cufflinks 1.496       Low
cufflinks 2.555        
cufflinks 1.617        
cufflinks 1.531        
cufflinks 1.881        
cufflinks 3.129       High
cufflinks 1.172       Low
cufflinks 2.617        
cufflinks 2.191        
cufflinks 3.231       High
cufflinks 1.71        
cufflinks 2.899       High
cufflinks 2.314        
cufflinks 1.725        
cufflinks 2.971       High
cufflinks 1.538        

0 Strain