Gene : Glyma.15G179600 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR33077:SF13 - PROTEIN TIFY 10A-RELATED Genomic Order:  1796
Name:  ? Glyma.15G179600 Secondary Identifier:  ? PAC:30497281
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G179600 0.5kb upstream 0.5kb upstream 3125 true Chr15: 17292280-17295404 Glycine max
Glyma.15G179600 0.5kb upstream 0.5kb upstream 500 false Chr15: 17292280-17292779 Glycine max
Glyma.15G179600 0.5kb downstream 0.5kb downstream 3125 true Chr15: 17292780-17295904 Glycine max
Glyma.15G179600 0.5kb downstream 0.5kb downstream 500 false Chr15: 17295405-17295904 Glycine max
Glyma.15G179600 1.0kb upstream 1.0kb upstream 3625 true Chr15: 17291780-17295404 Glycine max
Glyma.15G179600 1.0kb upstream 1.0kb upstream 1000 false Chr15: 17291780-17292779 Glycine max
Glyma.15G179600 1.0kb downstream 1.0kb downstream 3625 true Chr15: 17292780-17296404 Glycine max
Glyma.15G179600 1.0kb downstream 1.0kb downstream 1000 false Chr15: 17295405-17296404 Glycine max
Glyma.15G179600 2.0kb upstream 2.0kb upstream 4625 true Chr15: 17290780-17295404 Glycine max
Glyma.15G179600 2.0kb upstream 2.0kb upstream 2000 false Chr15: 17290780-17292779 Glycine max
Glyma.15G179600 2.0kb downstream 2.0kb downstream 4625 true Chr15: 17292780-17297404 Glycine max
Glyma.15G179600 2.0kb downstream 2.0kb downstream 2000 false Chr15: 17295405-17297404 Glycine max
Glyma.15G179600 5.0kb upstream 5.0kb upstream 7625 true Chr15: 17287780-17295404 Glycine max
Glyma.15G179600 5.0kb upstream 5.0kb upstream 5000 false Chr15: 17287780-17292779 Glycine max
Glyma.15G179600 5.0kb downstream 5.0kb downstream 7625 true Chr15: 17292780-17300404 Glycine max
Glyma.15G179600 5.0kb downstream 5.0kb downstream 5000 false Chr15: 17295405-17300404 Glycine max
Glyma.15G179600 10.0kb upstream 10.0kb upstream 12625 true Chr15: 17282780-17295404 Glycine max
Glyma.15G179600 10.0kb upstream 10.0kb upstream 10000 false Chr15: 17282780-17292779 Glycine max
Glyma.15G179600 10.0kb downstream 10.0kb downstream 12625 true Chr15: 17292780-17305404 Glycine max
Glyma.15G179600 10.0kb downstream 10.0kb downstream 10000 false Chr15: 17295405-17305404 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315145 5265 Fabidae View MSA
124071926 5270 Rosid View MSA
123747835 5271 Pentapetalae View MSA
122797679 5272 Eudicot View MSA
122046349 5273 Angiosperm View MSA
121349662 5274 Embryophyte View MSA
123381390 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 61.7288 0.0 270.157 High  
cufflinks 13.8046 0.0 59.3918    
cufflinks 102.711 0.0 464.667 High High
cufflinks 11.6293 0.0 51.7876    
cufflinks 29.9491 0.0 121.099 High  
cufflinks 70.5074 0.0 318.502 High  
cufflinks 4.4012 0.0 24.7099   Low
cufflinks 17.7969 0.0 74.7138    
cufflinks 31.5777 0.0 127.754 High  
cufflinks 49.396     High High
cufflinks 35.647     High  
cufflinks 15.62     High  
cufflinks 7.055        
cufflinks 2.564       Low
cufflinks 82.535     High High
cufflinks 3.486       Low
cufflinks 86.217     High High
cufflinks 4.173        
cufflinks 9.51     High  
cufflinks 2.929       Low
cufflinks 25.073     High  
cufflinks 2.484       Low
cufflinks 28.883     High  
cufflinks 23.8     High  
cufflinks 3.167       Low
cufflinks 66.829     High High

0 Strain