Gene : Glyma.15G170200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12789 - DENSITY-REGULATED PROTEIN HOMOLOG Genomic Order:  1702
Name:  ? Glyma.15G170200 Secondary Identifier:  ? PAC:30499978
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G170200 0.5kb upstream 0.5kb upstream 4743 true Chr15: 15309167-15313909 Glycine max
Glyma.15G170200 0.5kb upstream 0.5kb upstream 500 false Chr15: 15313410-15313909 Glycine max
Glyma.15G170200 0.5kb downstream 0.5kb downstream 4743 true Chr15: 15308667-15313409 Glycine max
Glyma.15G170200 0.5kb downstream 0.5kb downstream 500 false Chr15: 15308667-15309166 Glycine max
Glyma.15G170200 1.0kb upstream 1.0kb upstream 5243 true Chr15: 15309167-15314409 Glycine max
Glyma.15G170200 1.0kb upstream 1.0kb upstream 1000 false Chr15: 15313410-15314409 Glycine max
Glyma.15G170200 1.0kb downstream 1.0kb downstream 5243 true Chr15: 15308167-15313409 Glycine max
Glyma.15G170200 1.0kb downstream 1.0kb downstream 1000 false Chr15: 15308167-15309166 Glycine max
Glyma.15G170200 2.0kb upstream 2.0kb upstream 6243 true Chr15: 15309167-15315409 Glycine max
Glyma.15G170200 2.0kb upstream 2.0kb upstream 2000 false Chr15: 15313410-15315409 Glycine max
Glyma.15G170200 2.0kb downstream 2.0kb downstream 6243 true Chr15: 15307167-15313409 Glycine max
Glyma.15G170200 2.0kb downstream 2.0kb downstream 2000 false Chr15: 15307167-15309166 Glycine max
Glyma.15G170200 5.0kb upstream 5.0kb upstream 9243 true Chr15: 15309167-15318409 Glycine max
Glyma.15G170200 5.0kb upstream 5.0kb upstream 5000 false Chr15: 15313410-15318409 Glycine max
Glyma.15G170200 5.0kb downstream 5.0kb downstream 9243 true Chr15: 15304167-15313409 Glycine max
Glyma.15G170200 5.0kb downstream 5.0kb downstream 5000 false Chr15: 15304167-15309166 Glycine max
Glyma.15G170200 10.0kb upstream 10.0kb upstream 14243 true Chr15: 15309167-15323409 Glycine max
Glyma.15G170200 10.0kb upstream 10.0kb upstream 10000 false Chr15: 15313410-15323409 Glycine max
Glyma.15G170200 10.0kb downstream 10.0kb downstream 14243 true Chr15: 15299167-15313409 Glycine max
Glyma.15G170200 10.0kb downstream 10.0kb downstream 10000 false Chr15: 15299167-15309166 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301489 5265 Fabidae View MSA
124070344 5270 Rosid View MSA
123750636 5271 Pentapetalae View MSA
122790029 5272 Eudicot View MSA
122051404 5273 Angiosperm View MSA
121346997 5274 Embryophyte View MSA
123423903 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.8247 0.0 35.2306    
cufflinks 14.4545 0.0 39.398    
cufflinks 10.6677 0.0 29.7704   Low
cufflinks 19.8344 0.0 53.1745    
cufflinks 17.6343 0.0 47.4984    
cufflinks 16.9259 0.0 45.7034    
cufflinks 22.8582 0.0 61.0875 High High
cufflinks 19.1314 0.0 51.3732    
cufflinks 14.1342 0.0 38.5861    
cufflinks 3.33        
cufflinks 2.926        
cufflinks 3.271        
cufflinks 4.58       High
cufflinks 5.775       High
cufflinks 2.478        
cufflinks 2.193       Low
cufflinks 3.35        
cufflinks 3.607        
cufflinks 3.271        
cufflinks 2.195       Low
cufflinks 2.877        
cufflinks 2.45        
cufflinks 2.617        
cufflinks 2.939        
cufflinks 2.099       Low
cufflinks 3.377        

0 Strain