Gene : Glyma.15G171000 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR31250:SF13 - CALMODULIN-BINDING PROTEIN Genomic Order:  1710
Name:  ? Glyma.15G171000 Secondary Identifier:  ? PAC:30499235
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G171000 0.5kb upstream 0.5kb upstream 4684 true Chr15: 15601687-15606370 Glycine max
Glyma.15G171000 0.5kb upstream 0.5kb upstream 500 false Chr15: 15601687-15602186 Glycine max
Glyma.15G171000 0.5kb downstream 0.5kb downstream 4684 true Chr15: 15602187-15606870 Glycine max
Glyma.15G171000 0.5kb downstream 0.5kb downstream 500 false Chr15: 15606371-15606870 Glycine max
Glyma.15G171000 1.0kb upstream 1.0kb upstream 5184 true Chr15: 15601187-15606370 Glycine max
Glyma.15G171000 1.0kb upstream 1.0kb upstream 1000 false Chr15: 15601187-15602186 Glycine max
Glyma.15G171000 1.0kb downstream 1.0kb downstream 5184 true Chr15: 15602187-15607370 Glycine max
Glyma.15G171000 1.0kb downstream 1.0kb downstream 1000 false Chr15: 15606371-15607370 Glycine max
Glyma.15G171000 2.0kb upstream 2.0kb upstream 6184 true Chr15: 15600187-15606370 Glycine max
Glyma.15G171000 2.0kb upstream 2.0kb upstream 2000 false Chr15: 15600187-15602186 Glycine max
Glyma.15G171000 2.0kb downstream 2.0kb downstream 6184 true Chr15: 15602187-15608370 Glycine max
Glyma.15G171000 2.0kb downstream 2.0kb downstream 2000 false Chr15: 15606371-15608370 Glycine max
Glyma.15G171000 5.0kb upstream 5.0kb upstream 9184 true Chr15: 15597187-15606370 Glycine max
Glyma.15G171000 5.0kb upstream 5.0kb upstream 5000 false Chr15: 15597187-15602186 Glycine max
Glyma.15G171000 5.0kb downstream 5.0kb downstream 9184 true Chr15: 15602187-15611370 Glycine max
Glyma.15G171000 5.0kb downstream 5.0kb downstream 5000 false Chr15: 15606371-15611370 Glycine max
Glyma.15G171000 10.0kb upstream 10.0kb upstream 14184 true Chr15: 15592187-15606370 Glycine max
Glyma.15G171000 10.0kb upstream 10.0kb upstream 10000 false Chr15: 15592187-15602186 Glycine max
Glyma.15G171000 10.0kb downstream 10.0kb downstream 14184 true Chr15: 15602187-15616370 Glycine max
Glyma.15G171000 10.0kb downstream 10.0kb downstream 10000 false Chr15: 15606371-15616370 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313030 5265 Fabidae View MSA
124069504 5270 Rosid View MSA
123741985 5271 Pentapetalae View MSA
122797259 5272 Eudicot View MSA
122041581 5273 Angiosperm View MSA
121351725 5274 Embryophyte View MSA
123382293 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 30.7147 0.0 85.6421 High High
cufflinks 1.9786 0.0 6.17989    
cufflinks 5.38218 0.0 14.8292    
cufflinks 1.20683 0.0 4.0273    
cufflinks 1.61746 0.0 5.2103    
cufflinks 4.98927 0.0 13.8738    
cufflinks 1.69456 0.0 5.4177    
cufflinks 1.57466 0.0 5.06755    
cufflinks 1.96751 0.0 6.14242    
cufflinks 5.477        
cufflinks 40.837     High High
cufflinks 11.271     High  
cufflinks 7.847     High  
cufflinks 0.971       Low
cufflinks 16.88     High  
cufflinks 8.773     High  
cufflinks 69.694     High High
cufflinks 6.612        
cufflinks 2.009       Low
cufflinks 7.93     High  
cufflinks 27.16     High  
cufflinks 8.665     High  
cufflinks 7.043        
cufflinks 35.09     High High
cufflinks 6.049        
cufflinks 30.26     High  

0 Strain