Gene : Glyma.15G175800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31618:SF7 - MECHANOSENSITIVE ION CHANNEL PROTEIN 4-RELATED Genomic Order:  1758
Name:  ? Glyma.15G175800 Secondary Identifier:  ? PAC:30497503
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G175800 0.5kb upstream 0.5kb upstream 4555 true Chr15: 16558857-16563411 Glycine max
Glyma.15G175800 0.5kb upstream 0.5kb upstream 500 false Chr15: 16558857-16559356 Glycine max
Glyma.15G175800 0.5kb downstream 0.5kb downstream 4555 true Chr15: 16559357-16563911 Glycine max
Glyma.15G175800 0.5kb downstream 0.5kb downstream 500 false Chr15: 16563412-16563911 Glycine max
Glyma.15G175800 1.0kb upstream 1.0kb upstream 5055 true Chr15: 16558357-16563411 Glycine max
Glyma.15G175800 1.0kb upstream 1.0kb upstream 1000 false Chr15: 16558357-16559356 Glycine max
Glyma.15G175800 1.0kb downstream 1.0kb downstream 5055 true Chr15: 16559357-16564411 Glycine max
Glyma.15G175800 1.0kb downstream 1.0kb downstream 1000 false Chr15: 16563412-16564411 Glycine max
Glyma.15G175800 2.0kb upstream 2.0kb upstream 6055 true Chr15: 16557357-16563411 Glycine max
Glyma.15G175800 2.0kb upstream 2.0kb upstream 2000 false Chr15: 16557357-16559356 Glycine max
Glyma.15G175800 2.0kb downstream 2.0kb downstream 6055 true Chr15: 16559357-16565411 Glycine max
Glyma.15G175800 2.0kb downstream 2.0kb downstream 2000 false Chr15: 16563412-16565411 Glycine max
Glyma.15G175800 5.0kb upstream 5.0kb upstream 9055 true Chr15: 16554357-16563411 Glycine max
Glyma.15G175800 5.0kb upstream 5.0kb upstream 5000 false Chr15: 16554357-16559356 Glycine max
Glyma.15G175800 5.0kb downstream 5.0kb downstream 9055 true Chr15: 16559357-16568411 Glycine max
Glyma.15G175800 5.0kb downstream 5.0kb downstream 5000 false Chr15: 16563412-16568411 Glycine max
Glyma.15G175800 10.0kb upstream 10.0kb upstream 14055 true Chr15: 16549357-16563411 Glycine max
Glyma.15G175800 10.0kb upstream 10.0kb upstream 10000 false Chr15: 16549357-16559356 Glycine max
Glyma.15G175800 10.0kb downstream 10.0kb downstream 14055 true Chr15: 16559357-16573411 Glycine max
Glyma.15G175800 10.0kb downstream 10.0kb downstream 10000 false Chr15: 16563412-16573411 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041489 5273 Angiosperm View MSA
122304321 5265 Fabidae View MSA
124069991 5270 Rosid View MSA
123753249 5271 Pentapetalae View MSA
122794299 5272 Eudicot View MSA
121309858 5274 Embryophyte View MSA
123428857 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0275206 0.0 0.11308 Low Low
cufflinks 5.08873 0.0 15.9043   High
cufflinks 0.324886 0.0 1.46743    
cufflinks 0.671113 0.0 3.76489    
cufflinks 0.323038 0.0 1.49043    
cufflinks 0.229049 0.0 1.12261 Low  
cufflinks 0.814365 0.0 4.33213    
cufflinks 0.649257 0.0 2.7361    
cufflinks 0.153008 0.0 0.747626 Low  
cufflinks 0.362        
cufflinks 0.002     Low Low
cufflinks 0.614        
cufflinks 0.112        
cufflinks 0.113        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.328        
cufflinks 0.024     Low  
cufflinks 0.915        
cufflinks 3.067       High
cufflinks 0.286        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.348        
cufflinks 0.387        
cufflinks 0.002     Low Low
cufflinks 0.369        
cufflinks 0.009     Low Low

0 Strain