Gene : Glyma.15G161000 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR23089:SF3 - HISTIDINE TRIAD NUCLEOTIDE-BINDING PROTEIN 1 Genomic Order:  1610
Name:  ? Glyma.15G161000 Secondary Identifier:  ? PAC:30499951
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G161000 0.5kb upstream 0.5kb upstream 3792 true Chr15: 13712222-13716013 Glycine max
Glyma.15G161000 0.5kb upstream 0.5kb upstream 500 false Chr15: 13715514-13716013 Glycine max
Glyma.15G161000 0.5kb downstream 0.5kb downstream 3792 true Chr15: 13711722-13715513 Glycine max
Glyma.15G161000 0.5kb downstream 0.5kb downstream 500 false Chr15: 13711722-13712221 Glycine max
Glyma.15G161000 1.0kb upstream 1.0kb upstream 4292 true Chr15: 13712222-13716513 Glycine max
Glyma.15G161000 1.0kb upstream 1.0kb upstream 1000 false Chr15: 13715514-13716513 Glycine max
Glyma.15G161000 1.0kb downstream 1.0kb downstream 4292 true Chr15: 13711222-13715513 Glycine max
Glyma.15G161000 1.0kb downstream 1.0kb downstream 1000 false Chr15: 13711222-13712221 Glycine max
Glyma.15G161000 2.0kb upstream 2.0kb upstream 5292 true Chr15: 13712222-13717513 Glycine max
Glyma.15G161000 2.0kb upstream 2.0kb upstream 2000 false Chr15: 13715514-13717513 Glycine max
Glyma.15G161000 2.0kb downstream 2.0kb downstream 5292 true Chr15: 13710222-13715513 Glycine max
Glyma.15G161000 2.0kb downstream 2.0kb downstream 2000 false Chr15: 13710222-13712221 Glycine max
Glyma.15G161000 5.0kb upstream 5.0kb upstream 8292 true Chr15: 13712222-13720513 Glycine max
Glyma.15G161000 5.0kb upstream 5.0kb upstream 5000 false Chr15: 13715514-13720513 Glycine max
Glyma.15G161000 5.0kb downstream 5.0kb downstream 8292 true Chr15: 13707222-13715513 Glycine max
Glyma.15G161000 5.0kb downstream 5.0kb downstream 5000 false Chr15: 13707222-13712221 Glycine max
Glyma.15G161000 10.0kb upstream 10.0kb upstream 13292 true Chr15: 13712222-13725513 Glycine max
Glyma.15G161000 10.0kb upstream 10.0kb upstream 10000 false Chr15: 13715514-13725513 Glycine max
Glyma.15G161000 10.0kb downstream 10.0kb downstream 13292 true Chr15: 13702222-13715513 Glycine max
Glyma.15G161000 10.0kb downstream 10.0kb downstream 10000 false Chr15: 13702222-13712221 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303854 5265 Fabidae View MSA
124063268 5270 Rosid View MSA
123738121 5271 Pentapetalae View MSA
122789246 5272 Eudicot View MSA
122042822 5273 Angiosperm View MSA
121347396 5274 Embryophyte View MSA
123425482 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.0183 0.0 57.67    
cufflinks 25.3361 0.0 68.6238 High High
cufflinks 11.5027 0.0 33.418   Low
cufflinks 16.9333 0.0 47.2228    
cufflinks 13.6769 0.0 39.1645    
cufflinks 13.766 0.0 39.3435    
cufflinks 23.9666 0.0 65.1627 High High
cufflinks 13.7719 0.0 39.2824    
cufflinks 11.6067 0.0 33.8255   Low
cufflinks 3.546        
cufflinks 0.581       Low
cufflinks 3.372        
cufflinks 2.072        
cufflinks 2.391        
cufflinks 0.658       Low
cufflinks 5.415       High
cufflinks 1.053        
cufflinks 3.841        
cufflinks 4.355        
cufflinks 4.549        
cufflinks 0.69       Low
cufflinks 4.673        
cufflinks 5.74       High
cufflinks 0.741       Low
cufflinks 5.177        
cufflinks 1.176        

0 Strain