Gene : Glyma.15G164700 G. max Wm82.a2.v1
Defline:  (1 of 52) PF01535//PF12854//PF13041 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) Genomic Order:  1647
Name:  ? Glyma.15G164700 Secondary Identifier:  ? PAC:30498390
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G164700 0.5kb upstream 0.5kb upstream 7512 true Chr15: 14270625-14278136 Glycine max
Glyma.15G164700 0.5kb upstream 0.5kb upstream 500 false Chr15: 14277637-14278136 Glycine max
Glyma.15G164700 0.5kb downstream 0.5kb downstream 7512 true Chr15: 14270125-14277636 Glycine max
Glyma.15G164700 0.5kb downstream 0.5kb downstream 500 false Chr15: 14270125-14270624 Glycine max
Glyma.15G164700 1.0kb upstream 1.0kb upstream 8012 true Chr15: 14270625-14278636 Glycine max
Glyma.15G164700 1.0kb upstream 1.0kb upstream 1000 false Chr15: 14277637-14278636 Glycine max
Glyma.15G164700 1.0kb downstream 1.0kb downstream 8012 true Chr15: 14269625-14277636 Glycine max
Glyma.15G164700 1.0kb downstream 1.0kb downstream 1000 false Chr15: 14269625-14270624 Glycine max
Glyma.15G164700 2.0kb upstream 2.0kb upstream 9012 true Chr15: 14270625-14279636 Glycine max
Glyma.15G164700 2.0kb upstream 2.0kb upstream 2000 false Chr15: 14277637-14279636 Glycine max
Glyma.15G164700 2.0kb downstream 2.0kb downstream 9012 true Chr15: 14268625-14277636 Glycine max
Glyma.15G164700 2.0kb downstream 2.0kb downstream 2000 false Chr15: 14268625-14270624 Glycine max
Glyma.15G164700 5.0kb upstream 5.0kb upstream 12012 true Chr15: 14270625-14282636 Glycine max
Glyma.15G164700 5.0kb upstream 5.0kb upstream 5000 false Chr15: 14277637-14282636 Glycine max
Glyma.15G164700 5.0kb downstream 5.0kb downstream 12012 true Chr15: 14265625-14277636 Glycine max
Glyma.15G164700 5.0kb downstream 5.0kb downstream 5000 false Chr15: 14265625-14270624 Glycine max
Glyma.15G164700 10.0kb upstream 10.0kb upstream 17012 true Chr15: 14270625-14287636 Glycine max
Glyma.15G164700 10.0kb upstream 10.0kb upstream 10000 false Chr15: 14277637-14287636 Glycine max
Glyma.15G164700 10.0kb downstream 10.0kb downstream 17012 true Chr15: 14260625-14277636 Glycine max
Glyma.15G164700 10.0kb downstream 10.0kb downstream 10000 false Chr15: 14260625-14270624 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305531 5265 Fabidae View MSA
124066554 5270 Rosid View MSA
123736416 5271 Pentapetalae View MSA
122796728 5272 Eudicot View MSA
122045085 5273 Angiosperm View MSA
121310395 5274 Embryophyte View MSA
123347889 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.32948 0.0 5.64115    
cufflinks 1.50241 0.0 6.07926   High
cufflinks 1.23944 0.0 5.24532    
cufflinks 1.09923 0.0 4.85581    
cufflinks 0.818154 0.0 4.07586   Low
cufflinks 0.64461 0.0 2.4276   Low
cufflinks 1.46047 0.0 4.40066    
cufflinks 1.03227 0.0 4.72021    
cufflinks 1.28536 0.0 5.56942    
cufflinks 0.361        
cufflinks 0.175       Low
cufflinks 0.653        
cufflinks 0.447        
cufflinks 0.518        
cufflinks 0.609        
cufflinks 0.768        
cufflinks 0.381        
cufflinks 0.993       High
cufflinks 1.037       High
cufflinks 0.804        
cufflinks 0.211       Low
cufflinks 0.968       High
cufflinks 0.946        
cufflinks 0.223       Low
cufflinks 0.812        
cufflinks 0.181       Low

0 Strain