Gene : Glyma.15G165500 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR22957:SF28 - TBC1 DOMAIN FAMILY MEMBER 5 Genomic Order:  1655
Name:  ? Glyma.15G165500 Secondary Identifier:  ? PAC:30499024
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G165500 0.5kb upstream 0.5kb upstream 6295 true Chr15: 14362158-14368452 Glycine max
Glyma.15G165500 0.5kb upstream 0.5kb upstream 500 false Chr15: 14362158-14362657 Glycine max
Glyma.15G165500 0.5kb downstream 0.5kb downstream 6295 true Chr15: 14362658-14368952 Glycine max
Glyma.15G165500 0.5kb downstream 0.5kb downstream 500 false Chr15: 14368453-14368952 Glycine max
Glyma.15G165500 1.0kb upstream 1.0kb upstream 6795 true Chr15: 14361658-14368452 Glycine max
Glyma.15G165500 1.0kb upstream 1.0kb upstream 1000 false Chr15: 14361658-14362657 Glycine max
Glyma.15G165500 1.0kb downstream 1.0kb downstream 6795 true Chr15: 14362658-14369452 Glycine max
Glyma.15G165500 1.0kb downstream 1.0kb downstream 1000 false Chr15: 14368453-14369452 Glycine max
Glyma.15G165500 2.0kb upstream 2.0kb upstream 7795 true Chr15: 14360658-14368452 Glycine max
Glyma.15G165500 2.0kb upstream 2.0kb upstream 2000 false Chr15: 14360658-14362657 Glycine max
Glyma.15G165500 2.0kb downstream 2.0kb downstream 7795 true Chr15: 14362658-14370452 Glycine max
Glyma.15G165500 2.0kb downstream 2.0kb downstream 2000 false Chr15: 14368453-14370452 Glycine max
Glyma.15G165500 5.0kb upstream 5.0kb upstream 10795 true Chr15: 14357658-14368452 Glycine max
Glyma.15G165500 5.0kb upstream 5.0kb upstream 5000 false Chr15: 14357658-14362657 Glycine max
Glyma.15G165500 5.0kb downstream 5.0kb downstream 10795 true Chr15: 14362658-14373452 Glycine max
Glyma.15G165500 5.0kb downstream 5.0kb downstream 5000 false Chr15: 14368453-14373452 Glycine max
Glyma.15G165500 10.0kb upstream 10.0kb upstream 15795 true Chr15: 14352658-14368452 Glycine max
Glyma.15G165500 10.0kb upstream 10.0kb upstream 10000 false Chr15: 14352658-14362657 Glycine max
Glyma.15G165500 10.0kb downstream 10.0kb downstream 15795 true Chr15: 14362658-14378452 Glycine max
Glyma.15G165500 10.0kb downstream 10.0kb downstream 10000 false Chr15: 14368453-14378452 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314968 5265 Fabidae View MSA
124063811 5270 Rosid View MSA
123743864 5271 Pentapetalae View MSA
122788044 5272 Eudicot View MSA
122042280 5273 Angiosperm View MSA
121350721 5274 Embryophyte View MSA
123428432 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.89733 0.0 26.4143   High
cufflinks 3.32983 0.0 9.34208   Low
cufflinks 8.9842 0.0 23.9688   High
cufflinks 7.30395 0.0 19.5286    
cufflinks 4.34954 0.0 11.9228    
cufflinks 7.4096 0.0 19.8042    
cufflinks 4.59993 0.0 12.5755    
cufflinks 3.98545 0.0 10.9896    
cufflinks 5.8597 0.0 15.7789    
cufflinks 1.987       Low
cufflinks 20.137     High High
cufflinks 5.238        
cufflinks 3.895        
cufflinks 2.289       Low
cufflinks 19.429     High High
cufflinks 3.83        
cufflinks 3.303        
cufflinks 4.11        
cufflinks 3.411        
cufflinks 4.067        
cufflinks 12.297     High High
cufflinks 3.346        
cufflinks 2.43       Low
cufflinks 13.711     High High
cufflinks 4.177        
cufflinks 8.815     High  

0 Strain