Gene : Glyma.15G166300 G. max Wm82.a2.v1
Defline:  (1 of 63) PTHR23147:SF4 - SERINE/ARGININE-RICH SPLICING FACTOR 2 Genomic Order:  1663
Name:  ? Glyma.15G166300 Secondary Identifier:  ? PAC:30498482
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G166300 0.5kb upstream 0.5kb upstream 1910 true Chr15: 14447432-14449341 Glycine max
Glyma.15G166300 0.5kb upstream 0.5kb upstream 500 false Chr15: 14447432-14447931 Glycine max
Glyma.15G166300 0.5kb downstream 0.5kb downstream 1910 true Chr15: 14447932-14449841 Glycine max
Glyma.15G166300 0.5kb downstream 0.5kb downstream 500 false Chr15: 14449342-14449841 Glycine max
Glyma.15G166300 1.0kb upstream 1.0kb upstream 2410 true Chr15: 14446932-14449341 Glycine max
Glyma.15G166300 1.0kb upstream 1.0kb upstream 1000 false Chr15: 14446932-14447931 Glycine max
Glyma.15G166300 1.0kb downstream 1.0kb downstream 2410 true Chr15: 14447932-14450341 Glycine max
Glyma.15G166300 1.0kb downstream 1.0kb downstream 1000 false Chr15: 14449342-14450341 Glycine max
Glyma.15G166300 2.0kb upstream 2.0kb upstream 3410 true Chr15: 14445932-14449341 Glycine max
Glyma.15G166300 2.0kb upstream 2.0kb upstream 2000 false Chr15: 14445932-14447931 Glycine max
Glyma.15G166300 2.0kb downstream 2.0kb downstream 3410 true Chr15: 14447932-14451341 Glycine max
Glyma.15G166300 2.0kb downstream 2.0kb downstream 2000 false Chr15: 14449342-14451341 Glycine max
Glyma.15G166300 5.0kb upstream 5.0kb upstream 6410 true Chr15: 14442932-14449341 Glycine max
Glyma.15G166300 5.0kb upstream 5.0kb upstream 5000 false Chr15: 14442932-14447931 Glycine max
Glyma.15G166300 5.0kb downstream 5.0kb downstream 6410 true Chr15: 14447932-14454341 Glycine max
Glyma.15G166300 5.0kb downstream 5.0kb downstream 5000 false Chr15: 14449342-14454341 Glycine max
Glyma.15G166300 10.0kb upstream 10.0kb upstream 11410 true Chr15: 14437932-14449341 Glycine max
Glyma.15G166300 10.0kb upstream 10.0kb upstream 10000 false Chr15: 14437932-14447931 Glycine max
Glyma.15G166300 10.0kb downstream 10.0kb downstream 11410 true Chr15: 14447932-14459341 Glycine max
Glyma.15G166300 10.0kb downstream 10.0kb downstream 10000 false Chr15: 14449342-14459341 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121782035 5273 Angiosperm View MSA
122296546 5265 Fabidae View MSA
124040128 5270 Rosid View MSA
123751645 5271 Pentapetalae View MSA
122774115 5272 Eudicot View MSA
121053578 5274 Embryophyte View MSA
123093595 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0411104 0.0 1.18028 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.11036 0.0 2.08891 Low High
cufflinks 0.0695302 0.0 1.42095 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0894903 0.0 1.62378 Low  
cufflinks 0.0613086 0.0 1.3695 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.021     Low  
cufflinks 0.026     Low  
cufflinks 0.023     Low  
cufflinks 0.047     Low  
cufflinks 0.009     Low Low
cufflinks 0.026     Low  
cufflinks 0.079     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.058     Low  
cufflinks 0.106       High
cufflinks 0.041     Low  
cufflinks 0.015     Low Low
cufflinks 0.054     Low  
cufflinks 0.099     Low High
cufflinks 0.041     Low  
cufflinks 0.034     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain