Gene : Glyma.15G212300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR27001:SF183 - PROTEIN LYK5 Genomic Order:  2123
Name:  ? Glyma.15G212300 Secondary Identifier:  ? PAC:30496547
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G212300 0.5kb upstream 0.5kb upstream 1847 true Chr15: 33098200-33100046 Glycine max
Glyma.15G212300 0.5kb upstream 0.5kb upstream 500 false Chr15: 33099547-33100046 Glycine max
Glyma.15G212300 0.5kb downstream 0.5kb downstream 1847 true Chr15: 33097700-33099546 Glycine max
Glyma.15G212300 0.5kb downstream 0.5kb downstream 500 false Chr15: 33097700-33098199 Glycine max
Glyma.15G212300 1.0kb upstream 1.0kb upstream 2347 true Chr15: 33098200-33100546 Glycine max
Glyma.15G212300 1.0kb upstream 1.0kb upstream 1000 false Chr15: 33099547-33100546 Glycine max
Glyma.15G212300 1.0kb downstream 1.0kb downstream 2347 true Chr15: 33097200-33099546 Glycine max
Glyma.15G212300 1.0kb downstream 1.0kb downstream 1000 false Chr15: 33097200-33098199 Glycine max
Glyma.15G212300 2.0kb upstream 2.0kb upstream 3347 true Chr15: 33098200-33101546 Glycine max
Glyma.15G212300 2.0kb upstream 2.0kb upstream 2000 false Chr15: 33099547-33101546 Glycine max
Glyma.15G212300 2.0kb downstream 2.0kb downstream 3347 true Chr15: 33096200-33099546 Glycine max
Glyma.15G212300 2.0kb downstream 2.0kb downstream 2000 false Chr15: 33096200-33098199 Glycine max
Glyma.15G212300 5.0kb upstream 5.0kb upstream 6347 true Chr15: 33098200-33104546 Glycine max
Glyma.15G212300 5.0kb upstream 5.0kb upstream 5000 false Chr15: 33099547-33104546 Glycine max
Glyma.15G212300 5.0kb downstream 5.0kb downstream 6347 true Chr15: 33093200-33099546 Glycine max
Glyma.15G212300 5.0kb downstream 5.0kb downstream 5000 false Chr15: 33093200-33098199 Glycine max
Glyma.15G212300 10.0kb upstream 10.0kb upstream 11347 true Chr15: 33098200-33109546 Glycine max
Glyma.15G212300 10.0kb upstream 10.0kb upstream 10000 false Chr15: 33099547-33109546 Glycine max
Glyma.15G212300 10.0kb downstream 10.0kb downstream 11347 true Chr15: 33088200-33099546 Glycine max
Glyma.15G212300 10.0kb downstream 10.0kb downstream 10000 false Chr15: 33088200-33098199 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122249612 5265 Fabidae Singleton cluster - no MSA
123993014 5270 Rosid Singleton cluster - no MSA
123750988 5271 Pentapetalae View MSA
122792903 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0901255 0.0 0.363447 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0193804 0.0 0.0869643 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.149731 0.0 0.591259 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.009     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.025     Low High
cufflinks 0.014     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.013     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain