Gene : Glyma.15G205000 G. max Wm82.a2.v1
Defline:  (1 of 5) PF00077//PF00098 - Retroviral aspartyl protease (RVP) // Zinc knuckle (zf-CCHC) Genomic Order:  2050
Name:  ? Glyma.15G205000 Secondary Identifier:  ? PAC:30497743
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G205000 0.5kb upstream 0.5kb upstream 2445 true Chr15: 27363898-27366342 Glycine max
Glyma.15G205000 0.5kb upstream 0.5kb upstream 500 false Chr15: 27365843-27366342 Glycine max
Glyma.15G205000 0.5kb downstream 0.5kb downstream 2445 true Chr15: 27363398-27365842 Glycine max
Glyma.15G205000 0.5kb downstream 0.5kb downstream 500 false Chr15: 27363398-27363897 Glycine max
Glyma.15G205000 1.0kb upstream 1.0kb upstream 2945 true Chr15: 27363898-27366842 Glycine max
Glyma.15G205000 1.0kb upstream 1.0kb upstream 1000 false Chr15: 27365843-27366842 Glycine max
Glyma.15G205000 1.0kb downstream 1.0kb downstream 2945 true Chr15: 27362898-27365842 Glycine max
Glyma.15G205000 1.0kb downstream 1.0kb downstream 1000 false Chr15: 27362898-27363897 Glycine max
Glyma.15G205000 2.0kb upstream 2.0kb upstream 3945 true Chr15: 27363898-27367842 Glycine max
Glyma.15G205000 2.0kb upstream 2.0kb upstream 2000 false Chr15: 27365843-27367842 Glycine max
Glyma.15G205000 2.0kb downstream 2.0kb downstream 3945 true Chr15: 27361898-27365842 Glycine max
Glyma.15G205000 2.0kb downstream 2.0kb downstream 2000 false Chr15: 27361898-27363897 Glycine max
Glyma.15G205000 5.0kb upstream 5.0kb upstream 6945 true Chr15: 27363898-27370842 Glycine max
Glyma.15G205000 5.0kb upstream 5.0kb upstream 5000 false Chr15: 27365843-27370842 Glycine max
Glyma.15G205000 5.0kb downstream 5.0kb downstream 6945 true Chr15: 27358898-27365842 Glycine max
Glyma.15G205000 5.0kb downstream 5.0kb downstream 5000 false Chr15: 27358898-27363897 Glycine max
Glyma.15G205000 10.0kb upstream 10.0kb upstream 11945 true Chr15: 27363898-27375842 Glycine max
Glyma.15G205000 10.0kb upstream 10.0kb upstream 10000 false Chr15: 27365843-27375842 Glycine max
Glyma.15G205000 10.0kb downstream 10.0kb downstream 11945 true Chr15: 27353898-27365842 Glycine max
Glyma.15G205000 10.0kb downstream 10.0kb downstream 10000 false Chr15: 27353898-27363897 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028362 5273 Angiosperm View MSA
122250435 5265 Fabidae View MSA
124040401 5270 Rosid View MSA
123751157 5271 Pentapetalae View MSA
122773930 5272 Eudicot View MSA
121297863 5274 Embryophyte View MSA
123335877 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0124797 0.0 0.0567208 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0127975 0.0 0.0581653 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain