Gene : Glyma.15G209000 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR11545:SF7 - 50S RIBOSOMAL PROTEIN L13, CHLOROPLASTIC Genomic Order:  2090
Name:  ? Glyma.15G209000 Secondary Identifier:  ? PAC:30497780
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G209000 0.5kb upstream 0.5kb upstream 4068 true Chr15: 31267238-31271305 Glycine max
Glyma.15G209000 0.5kb upstream 0.5kb upstream 500 false Chr15: 31270806-31271305 Glycine max
Glyma.15G209000 0.5kb downstream 0.5kb downstream 4068 true Chr15: 31266738-31270805 Glycine max
Glyma.15G209000 0.5kb downstream 0.5kb downstream 500 false Chr15: 31266738-31267237 Glycine max
Glyma.15G209000 1.0kb upstream 1.0kb upstream 4568 true Chr15: 31267238-31271805 Glycine max
Glyma.15G209000 1.0kb upstream 1.0kb upstream 1000 false Chr15: 31270806-31271805 Glycine max
Glyma.15G209000 1.0kb downstream 1.0kb downstream 4568 true Chr15: 31266238-31270805 Glycine max
Glyma.15G209000 1.0kb downstream 1.0kb downstream 1000 false Chr15: 31266238-31267237 Glycine max
Glyma.15G209000 2.0kb upstream 2.0kb upstream 5568 true Chr15: 31267238-31272805 Glycine max
Glyma.15G209000 2.0kb upstream 2.0kb upstream 2000 false Chr15: 31270806-31272805 Glycine max
Glyma.15G209000 2.0kb downstream 2.0kb downstream 5568 true Chr15: 31265238-31270805 Glycine max
Glyma.15G209000 2.0kb downstream 2.0kb downstream 2000 false Chr15: 31265238-31267237 Glycine max
Glyma.15G209000 5.0kb upstream 5.0kb upstream 8568 true Chr15: 31267238-31275805 Glycine max
Glyma.15G209000 5.0kb upstream 5.0kb upstream 5000 false Chr15: 31270806-31275805 Glycine max
Glyma.15G209000 5.0kb downstream 5.0kb downstream 8568 true Chr15: 31262238-31270805 Glycine max
Glyma.15G209000 5.0kb downstream 5.0kb downstream 5000 false Chr15: 31262238-31267237 Glycine max
Glyma.15G209000 10.0kb upstream 10.0kb upstream 13568 true Chr15: 31267238-31280805 Glycine max
Glyma.15G209000 10.0kb upstream 10.0kb upstream 10000 false Chr15: 31270806-31280805 Glycine max
Glyma.15G209000 10.0kb downstream 10.0kb downstream 13568 true Chr15: 31257238-31270805 Glycine max
Glyma.15G209000 10.0kb downstream 10.0kb downstream 10000 false Chr15: 31257238-31267237 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303125 5265 Fabidae View MSA
124064929 5270 Rosid View MSA
123742775 5271 Pentapetalae View MSA
122786889 5272 Eudicot View MSA
122046180 5273 Angiosperm View MSA
121346558 5274 Embryophyte View MSA
123428776 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 49.3802 0.0 133.452 High High
cufflinks 68.9239 0.0 190.364 High High
cufflinks 15.5313 0.0 42.4307    
cufflinks 25.4555 0.0 68.0137 High  
cufflinks 14.4177 0.0 39.4866    
cufflinks 11.1926 0.0 31.3592    
cufflinks 25.1238 0.0 67.1342 High  
cufflinks 19.4326 0.0 52.3558    
cufflinks 8.14427 0.0 23.6733   Low
cufflinks 8.979     High  
cufflinks 0.635       Low
cufflinks 6.031        
cufflinks 2.209        
cufflinks 2.071        
cufflinks 0.441       Low
cufflinks 52.689     High High
cufflinks 1.081        
cufflinks 6.948        
cufflinks 14.897     High  
cufflinks 52.085     High High
cufflinks 1.133        
cufflinks 45.485     High High
cufflinks 46.337     High High
cufflinks 1.128        
cufflinks 51.961     High High
cufflinks 0.884       Low

0 Strain