Gene : Glyma.15G193400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11827 - SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS Genomic Order:  1934
Name:  ? Glyma.15G193400 Secondary Identifier:  ? PAC:30499544
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G193400 0.5kb upstream 0.5kb upstream 19958 true Chr15: 21255306-21275263 Glycine max
Glyma.15G193400 0.5kb upstream 0.5kb upstream 500 false Chr15: 21255306-21255805 Glycine max
Glyma.15G193400 0.5kb downstream 0.5kb downstream 19958 true Chr15: 21255806-21275763 Glycine max
Glyma.15G193400 0.5kb downstream 0.5kb downstream 500 false Chr15: 21275264-21275763 Glycine max
Glyma.15G193400 1.0kb upstream 1.0kb upstream 20458 true Chr15: 21254806-21275263 Glycine max
Glyma.15G193400 1.0kb upstream 1.0kb upstream 1000 false Chr15: 21254806-21255805 Glycine max
Glyma.15G193400 1.0kb downstream 1.0kb downstream 20458 true Chr15: 21255806-21276263 Glycine max
Glyma.15G193400 1.0kb downstream 1.0kb downstream 1000 false Chr15: 21275264-21276263 Glycine max
Glyma.15G193400 2.0kb upstream 2.0kb upstream 21458 true Chr15: 21253806-21275263 Glycine max
Glyma.15G193400 2.0kb upstream 2.0kb upstream 2000 false Chr15: 21253806-21255805 Glycine max
Glyma.15G193400 2.0kb downstream 2.0kb downstream 21458 true Chr15: 21255806-21277263 Glycine max
Glyma.15G193400 2.0kb downstream 2.0kb downstream 2000 false Chr15: 21275264-21277263 Glycine max
Glyma.15G193400 5.0kb upstream 5.0kb upstream 24458 true Chr15: 21250806-21275263 Glycine max
Glyma.15G193400 5.0kb upstream 5.0kb upstream 5000 false Chr15: 21250806-21255805 Glycine max
Glyma.15G193400 5.0kb downstream 5.0kb downstream 24458 true Chr15: 21255806-21280263 Glycine max
Glyma.15G193400 5.0kb downstream 5.0kb downstream 5000 false Chr15: 21275264-21280263 Glycine max
Glyma.15G193400 10.0kb upstream 10.0kb upstream 29458 true Chr15: 21245806-21275263 Glycine max
Glyma.15G193400 10.0kb upstream 10.0kb upstream 10000 false Chr15: 21245806-21255805 Glycine max
Glyma.15G193400 10.0kb downstream 10.0kb downstream 29458 true Chr15: 21255806-21285263 Glycine max
Glyma.15G193400 10.0kb downstream 10.0kb downstream 10000 false Chr15: 21275264-21285263 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307906 5265 Fabidae View MSA
124066171 5270 Rosid View MSA
123736860 5271 Pentapetalae View MSA
122786911 5272 Eudicot View MSA
122042525 5273 Angiosperm View MSA
121347955 5274 Embryophyte View MSA
123428198 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.5256 0.0 20.3576   Low
cufflinks 7.17289 0.0 25.2363    
cufflinks 10.558 0.0 33.3518   High
cufflinks 9.64344 0.0 37.2674    
cufflinks 10.8119 0.0 37.8551   High
cufflinks 9.42493 0.0 29.4865    
cufflinks 6.12074 0.0 22.5167   Low
cufflinks 9.71916 0.0 33.4341    
cufflinks 7.50624 0.0 26.4349    
cufflinks 0.761       High
cufflinks 0.564        
cufflinks 0.564        
cufflinks 0.688        
cufflinks 0.845       High
cufflinks 0.381       Low
cufflinks 0.481        
cufflinks 0.291       Low
cufflinks 0.743       High
cufflinks 0.616        
cufflinks 0.355       Low
cufflinks 0.579        
cufflinks 0.428        
cufflinks 0.477        
cufflinks 0.727       High
cufflinks 0.373       Low
cufflinks 0.565        

0 Strain