Gene : Glyma.15G195200 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR32100:SF13 - OMEGA-6 FATTY ACID DESATURASE, ENDOPLASMIC RETICULUM Genomic Order:  1952
Name:  ? Glyma.15G195200 Secondary Identifier:  ? PAC:30495992
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5995 Glycine max pathologic  
Gmax PWY-762 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G195200 0.5kb upstream 0.5kb upstream 1382 true Chr15: 22308021-22309402 Glycine max
Glyma.15G195200 0.5kb upstream 0.5kb upstream 500 false Chr15: 22308903-22309402 Glycine max
Glyma.15G195200 0.5kb downstream 0.5kb downstream 1382 true Chr15: 22307521-22308902 Glycine max
Glyma.15G195200 0.5kb downstream 0.5kb downstream 500 false Chr15: 22307521-22308020 Glycine max
Glyma.15G195200 1.0kb upstream 1.0kb upstream 1882 true Chr15: 22308021-22309902 Glycine max
Glyma.15G195200 1.0kb upstream 1.0kb upstream 1000 false Chr15: 22308903-22309902 Glycine max
Glyma.15G195200 1.0kb downstream 1.0kb downstream 1882 true Chr15: 22307021-22308902 Glycine max
Glyma.15G195200 1.0kb downstream 1.0kb downstream 1000 false Chr15: 22307021-22308020 Glycine max
Glyma.15G195200 2.0kb upstream 2.0kb upstream 2882 true Chr15: 22308021-22310902 Glycine max
Glyma.15G195200 2.0kb upstream 2.0kb upstream 2000 false Chr15: 22308903-22310902 Glycine max
Glyma.15G195200 2.0kb downstream 2.0kb downstream 2882 true Chr15: 22306021-22308902 Glycine max
Glyma.15G195200 2.0kb downstream 2.0kb downstream 2000 false Chr15: 22306021-22308020 Glycine max
Glyma.15G195200 5.0kb upstream 5.0kb upstream 5882 true Chr15: 22308021-22313902 Glycine max
Glyma.15G195200 5.0kb upstream 5.0kb upstream 5000 false Chr15: 22308903-22313902 Glycine max
Glyma.15G195200 5.0kb downstream 5.0kb downstream 5882 true Chr15: 22303021-22308902 Glycine max
Glyma.15G195200 5.0kb downstream 5.0kb downstream 5000 false Chr15: 22303021-22308020 Glycine max
Glyma.15G195200 10.0kb upstream 10.0kb upstream 10882 true Chr15: 22308021-22318902 Glycine max
Glyma.15G195200 10.0kb upstream 10.0kb upstream 10000 false Chr15: 22308903-22318902 Glycine max
Glyma.15G195200 10.0kb downstream 10.0kb downstream 10882 true Chr15: 22298021-22308902 Glycine max
Glyma.15G195200 10.0kb downstream 10.0kb downstream 10000 false Chr15: 22298021-22308020 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041215 5273 Angiosperm View MSA
122249698 5265 Fabidae Singleton cluster - no MSA
124074119 5270 Rosid View MSA
123747966 5271 Pentapetalae View MSA
122789327 5272 Eudicot View MSA
121347269 5274 Embryophyte View MSA
123426688 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.64733 0.0 15.6906    
cufflinks 4.67134 0.0 15.7438    
cufflinks 1.67624 0.0 6.13064   Low
cufflinks 8.23623 0.0 25.7089   High
cufflinks 5.4566 0.0 18.0505    
cufflinks 0.989597 0.0 3.72152   Low
cufflinks 4.59647 0.0 15.512    
cufflinks 2.29221 0.0 8.22713    
cufflinks 4.95635 0.0 16.5593    
cufflinks 0.018     Low Low
cufflinks 0.023     Low Low
cufflinks 0.051     Low  
cufflinks 0.249       High
cufflinks 0.021     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.021     Low Low
cufflinks 0.139        
cufflinks 0.3       High
cufflinks 0.113        
cufflinks 0.1        
cufflinks 0.095        
cufflinks 0.037     Low  
cufflinks 0.141        
cufflinks 0.088        
cufflinks 0.016     Low Low
cufflinks 0.09        

0 Strain