Gene : Glyma.15G195600 G. max Wm82.a2.v1
Defline:  (1 of 8) PF05512 - AWPM-19-like family (AWPM-19) Genomic Order:  1956
Name:  ? Glyma.15G195600 Secondary Identifier:  ? PAC:30496531
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G195600 0.5kb upstream 0.5kb upstream 2206 true Chr15: 22370792-22372997 Glycine max
Glyma.15G195600 0.5kb upstream 0.5kb upstream 500 false Chr15: 22370792-22371291 Glycine max
Glyma.15G195600 0.5kb downstream 0.5kb downstream 2206 true Chr15: 22371292-22373497 Glycine max
Glyma.15G195600 0.5kb downstream 0.5kb downstream 500 false Chr15: 22372998-22373497 Glycine max
Glyma.15G195600 1.0kb upstream 1.0kb upstream 2706 true Chr15: 22370292-22372997 Glycine max
Glyma.15G195600 1.0kb upstream 1.0kb upstream 1000 false Chr15: 22370292-22371291 Glycine max
Glyma.15G195600 1.0kb downstream 1.0kb downstream 2706 true Chr15: 22371292-22373997 Glycine max
Glyma.15G195600 1.0kb downstream 1.0kb downstream 1000 false Chr15: 22372998-22373997 Glycine max
Glyma.15G195600 2.0kb upstream 2.0kb upstream 3706 true Chr15: 22369292-22372997 Glycine max
Glyma.15G195600 2.0kb upstream 2.0kb upstream 2000 false Chr15: 22369292-22371291 Glycine max
Glyma.15G195600 2.0kb downstream 2.0kb downstream 3706 true Chr15: 22371292-22374997 Glycine max
Glyma.15G195600 2.0kb downstream 2.0kb downstream 2000 false Chr15: 22372998-22374997 Glycine max
Glyma.15G195600 5.0kb upstream 5.0kb upstream 6706 true Chr15: 22366292-22372997 Glycine max
Glyma.15G195600 5.0kb upstream 5.0kb upstream 5000 false Chr15: 22366292-22371291 Glycine max
Glyma.15G195600 5.0kb downstream 5.0kb downstream 6706 true Chr15: 22371292-22377997 Glycine max
Glyma.15G195600 5.0kb downstream 5.0kb downstream 5000 false Chr15: 22372998-22377997 Glycine max
Glyma.15G195600 10.0kb upstream 10.0kb upstream 11706 true Chr15: 22361292-22372997 Glycine max
Glyma.15G195600 10.0kb upstream 10.0kb upstream 10000 false Chr15: 22361292-22371291 Glycine max
Glyma.15G195600 10.0kb downstream 10.0kb downstream 11706 true Chr15: 22371292-22382997 Glycine max
Glyma.15G195600 10.0kb downstream 10.0kb downstream 10000 false Chr15: 22372998-22382997 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310480 5265 Fabidae View MSA
124067384 5270 Rosid View MSA
123740214 5271 Pentapetalae View MSA
122788901 5272 Eudicot View MSA
122050396 5273 Angiosperm View MSA
121349282 5274 Embryophyte View MSA
123381254 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.24315 0.0 4.60414    
cufflinks 2.19865 0.0 7.86328    
cufflinks 3.42075 0.0 11.7575    
cufflinks 2.44862 0.0 8.68888    
cufflinks 6.80641 0.0 21.5251    
cufflinks 3.68563 0.0 12.6213    
cufflinks 0.35719 0.0 1.39707   Low
cufflinks 3.91164 0.0 13.2443    
cufflinks 9.61712 0.0 28.8376   High
cufflinks 6.985       High
cufflinks 3.727        
cufflinks 1.536        
cufflinks 7.351     High High
cufflinks 1.997        
cufflinks 0.261       Low
cufflinks 2.48        
cufflinks 5.708        
cufflinks 4.842        
cufflinks 0.843       Low
cufflinks 2.919        
cufflinks 5.02        
cufflinks 3.258        
cufflinks 2.235        
cufflinks 2.464        
cufflinks 3.295        
cufflinks 5.374        

0 Strain