Gene : Glyma.15G198100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR15414 - OS-9-RELATED Genomic Order:  1981
Name:  ? Glyma.15G198100 Secondary Identifier:  ? PAC:30498132
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G198100 0.5kb upstream 0.5kb upstream 4497 true Chr15: 23258221-23262717 Glycine max
Glyma.15G198100 0.5kb upstream 0.5kb upstream 500 false Chr15: 23258221-23258720 Glycine max
Glyma.15G198100 0.5kb downstream 0.5kb downstream 4497 true Chr15: 23258721-23263217 Glycine max
Glyma.15G198100 0.5kb downstream 0.5kb downstream 500 false Chr15: 23262718-23263217 Glycine max
Glyma.15G198100 1.0kb upstream 1.0kb upstream 4997 true Chr15: 23257721-23262717 Glycine max
Glyma.15G198100 1.0kb upstream 1.0kb upstream 1000 false Chr15: 23257721-23258720 Glycine max
Glyma.15G198100 1.0kb downstream 1.0kb downstream 4997 true Chr15: 23258721-23263717 Glycine max
Glyma.15G198100 1.0kb downstream 1.0kb downstream 1000 false Chr15: 23262718-23263717 Glycine max
Glyma.15G198100 2.0kb upstream 2.0kb upstream 5997 true Chr15: 23256721-23262717 Glycine max
Glyma.15G198100 2.0kb upstream 2.0kb upstream 2000 false Chr15: 23256721-23258720 Glycine max
Glyma.15G198100 2.0kb downstream 2.0kb downstream 5997 true Chr15: 23258721-23264717 Glycine max
Glyma.15G198100 2.0kb downstream 2.0kb downstream 2000 false Chr15: 23262718-23264717 Glycine max
Glyma.15G198100 5.0kb upstream 5.0kb upstream 8997 true Chr15: 23253721-23262717 Glycine max
Glyma.15G198100 5.0kb upstream 5.0kb upstream 5000 false Chr15: 23253721-23258720 Glycine max
Glyma.15G198100 5.0kb downstream 5.0kb downstream 8997 true Chr15: 23258721-23267717 Glycine max
Glyma.15G198100 5.0kb downstream 5.0kb downstream 5000 false Chr15: 23262718-23267717 Glycine max
Glyma.15G198100 10.0kb upstream 10.0kb upstream 13997 true Chr15: 23248721-23262717 Glycine max
Glyma.15G198100 10.0kb upstream 10.0kb upstream 10000 false Chr15: 23248721-23258720 Glycine max
Glyma.15G198100 10.0kb downstream 10.0kb downstream 13997 true Chr15: 23258721-23272717 Glycine max
Glyma.15G198100 10.0kb downstream 10.0kb downstream 10000 false Chr15: 23262718-23272717 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026793 5273 Angiosperm View MSA
122305548 5265 Fabidae View MSA
124069455 5270 Rosid View MSA
123747319 5271 Pentapetalae View MSA
122794810 5272 Eudicot View MSA
121348244 5274 Embryophyte View MSA
123425730 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 28.6148 0.0 76.3862 High  
cufflinks 18.7243 0.0 50.2267   Low
cufflinks 24.7347 0.0 65.9929 High  
cufflinks 26.3263 0.0 70.2382 High  
cufflinks 20.5822 0.0 55.0498 High  
cufflinks 38.032 0.0 102.266 High High
cufflinks 26.618 0.0 71.0135 High  
cufflinks 21.324 0.0 57.0018 High  
cufflinks 26.4702 0.0 70.621 High  
cufflinks 4.606       Low
cufflinks 9.861     High High
cufflinks 7.408     High  
cufflinks 7.021        
cufflinks 6.784     High  
cufflinks 9.104     High High
cufflinks 6.287        
cufflinks 2.997       Low
cufflinks 6.728        
cufflinks 4.931        
cufflinks 7.02     High  
cufflinks 7.636     High  
cufflinks 6.237        
cufflinks 4.939        
cufflinks 9.602     High High
cufflinks 6.204        
cufflinks 6.653     High  

0 Strain