Gene : Glyma.15G198300 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR12948 - NEDD8 ULTIMATE BUSTER-1 BS4 PROTEIN Genomic Order:  1983
Name:  ? Glyma.15G198300 Secondary Identifier:  ? PAC:30499215
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G198300 0.5kb upstream 0.5kb upstream 5774 true Chr15: 23341071-23346844 Glycine max
Glyma.15G198300 0.5kb upstream 0.5kb upstream 500 false Chr15: 23346345-23346844 Glycine max
Glyma.15G198300 0.5kb downstream 0.5kb downstream 5774 true Chr15: 23340571-23346344 Glycine max
Glyma.15G198300 0.5kb downstream 0.5kb downstream 500 false Chr15: 23340571-23341070 Glycine max
Glyma.15G198300 1.0kb upstream 1.0kb upstream 6274 true Chr15: 23341071-23347344 Glycine max
Glyma.15G198300 1.0kb upstream 1.0kb upstream 1000 false Chr15: 23346345-23347344 Glycine max
Glyma.15G198300 1.0kb downstream 1.0kb downstream 6274 true Chr15: 23340071-23346344 Glycine max
Glyma.15G198300 1.0kb downstream 1.0kb downstream 1000 false Chr15: 23340071-23341070 Glycine max
Glyma.15G198300 2.0kb upstream 2.0kb upstream 7274 true Chr15: 23341071-23348344 Glycine max
Glyma.15G198300 2.0kb upstream 2.0kb upstream 2000 false Chr15: 23346345-23348344 Glycine max
Glyma.15G198300 2.0kb downstream 2.0kb downstream 7274 true Chr15: 23339071-23346344 Glycine max
Glyma.15G198300 2.0kb downstream 2.0kb downstream 2000 false Chr15: 23339071-23341070 Glycine max
Glyma.15G198300 5.0kb upstream 5.0kb upstream 10274 true Chr15: 23341071-23351344 Glycine max
Glyma.15G198300 5.0kb upstream 5.0kb upstream 5000 false Chr15: 23346345-23351344 Glycine max
Glyma.15G198300 5.0kb downstream 5.0kb downstream 10274 true Chr15: 23336071-23346344 Glycine max
Glyma.15G198300 5.0kb downstream 5.0kb downstream 5000 false Chr15: 23336071-23341070 Glycine max
Glyma.15G198300 10.0kb upstream 10.0kb upstream 15274 true Chr15: 23341071-23356344 Glycine max
Glyma.15G198300 10.0kb upstream 10.0kb upstream 10000 false Chr15: 23346345-23356344 Glycine max
Glyma.15G198300 10.0kb downstream 10.0kb downstream 15274 true Chr15: 23331071-23346344 Glycine max
Glyma.15G198300 10.0kb downstream 10.0kb downstream 10000 false Chr15: 23331071-23341070 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303079 5265 Fabidae View MSA
124064504 5270 Rosid View MSA
123740631 5271 Pentapetalae View MSA
122788504 5272 Eudicot View MSA
122046197 5273 Angiosperm View MSA
123429148 5275 Viridiplantae View MSA
121344011 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.0207 0.0 45.5721    
cufflinks 8.8712 0.0 23.8645   Low
cufflinks 13.3795 0.0 35.6949    
cufflinks 15.1969 0.0 40.5892    
cufflinks 20.6537 0.0 55.7311 High  
cufflinks 8.19371 0.0 22.1203   Low
cufflinks 20.02 0.0 53.9042    
cufflinks 13.4524 0.0 35.891    
cufflinks 31.3817 0.0 87.1889 High High
cufflinks 4.568        
cufflinks 25.98     High High
cufflinks 6.5        
cufflinks 3.64        
cufflinks 3.239        
cufflinks 31.402     High High
cufflinks 4.235        
cufflinks 11.875     High  
cufflinks 6.479        
cufflinks 4.755        
cufflinks 3.312        
cufflinks 26.796     High High
cufflinks 3.536        
cufflinks 3.154        
cufflinks 18.977     High High
cufflinks 3.302        
cufflinks 16.597     High  

0 Strain